RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 M0QZQ0 153 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 ARNTLO00327 626 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 SLC16A4O15374 487 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 ATG13O75143 517 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 OAZ2O95190 189 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 LARGE1O95461 756 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 ODC1P11926 461 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 PAX3P23760 479 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 HOXA6P31267 233 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 SOX9P48436 509 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 NEK4P51957 841 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 LIMK1P53667 647 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 SRSF5Q13243 272 aaKnown RBP12.57□□□□□ -0.4
CMTM1-216ENST00000533078 GPR17Q13304 367 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 MYBPC2Q14324 1141 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 GAS6Q14393 721 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 PON2Q15165 354 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 ECM1Q16610 540 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 GPR158Q5T848 1215 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 OVOS1Q6IE37 1185 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 ZPBP2Q6X784 338 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 CACNA2D4Q7Z3S7 1137 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 BEST2Q8NFU1 509 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 KIF12Q96FN5 646 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 LOXL4Q96JB6 756 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 TUBGCP4Q9UGJ1 667 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 ZMYM5Q9UJ78 669 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 SLC8A2Q9UPR5 921 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 TIMM13Q9Y5L4 95 aaPredicted RBP12.57□□□□□ -0.4
CMTM1-216ENST00000533078 LAMA1P25391 3075 aa12.57□□□□□ -0.4
CMTM1-216ENST00000533078 E9PMD0 336 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 K7ESF4 209 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 LAD1O00515 517 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 AXIN1O15169 862 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 GDF9O60383 454 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 RPP40O75818 363 aaKnown RBP12.56□□□□□ -0.4
CMTM1-216ENST00000533078 CLTAP09496 248 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 CXCL8P10145 99 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 CYP3A5P20815 502 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 GABRR2P28476 465 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 CDC25CP30307 473 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 TUFMP49411 452 aaKnown RBP12.56□□□□□ -0.4
CMTM1-216ENST00000533078 HMGN5P82970 282 aaKnown RBP12.56□□□□□ -0.4
CMTM1-216ENST00000533078 GRSF1Q12849 480 aaKnown RBP eCLIP12.56□□□□□ -0.4
CMTM1-216ENST00000533078 ZRSR1Q15695 479 aaKnown RBP12.56□□□□□ -0.4
CMTM1-216ENST00000533078 SLC10A6Q3KNW5 377 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 ITPRIPL2Q3MIP1 535 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 Q6ZS52 159 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 TMC8Q8IU68 726 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 TTC8Q8TAM2 541 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 BPIFB1Q8TDL5 484 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 SPIRE2Q8WWL2 714 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 PSMG2Q969U7 264 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 CDK5RAP3Q96JB5 506 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 TSPAN18Q96SJ8 248 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 ARRDC1-AS1Q9H2J1 176 aa12.56□□□□□ -0.4
CMTM1-216ENST00000533078 CCDC163A0A0D9SF12 145 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 NRG2O14511 850 aaPredicted RBP12.55□□□□□ -0.4
CMTM1-216ENST00000533078 OR4Q2P0C623 313 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 PLS3P13797 630 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 TYMPP19971 482 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 LRPAP1P30533 357 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 MCM2P49736 904 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 MCL1Q07820 350 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 CCINQ13939 588 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 SEZ6Q53EL9 994 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 RINT1Q6NUQ1 792 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 DTHD1Q6ZMT9 781 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 TAS1R3Q7RTX0 852 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 DNAJB7Q7Z6W7 309 aaPredicted RBP12.55□□□□□ -0.4
CMTM1-216ENST00000533078 DAW1Q8N136 415 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 IGSF22Q8N9C0 903 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 GAB3Q8WWW8 586 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 ZBTB45Q96K62 511 aaPredicted RBP12.55□□□□□ -0.4
CMTM1-216ENST00000533078 TMEM209Q96SK2 561 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 SEPT5Q99719 369 aaPredicted RBP12.55□□□□□ -0.4
CMTM1-216ENST00000533078 LLPHQ9BRT6 129 aaKnown RBP12.55□□□□□ -0.4
CMTM1-216ENST00000533078 NTPCRQ9BSD7 190 aaKnown RBP12.55□□□□□ -0.4
CMTM1-216ENST00000533078 RUSC1Q9BVN2 902 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 TASP1Q9H6P5 420 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 RPF1Q9H9Y2 349 aaKnown RBP12.55□□□□□ -0.4
CMTM1-216ENST00000533078 GTSE1Q9NYZ3 720 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 LARSQ9P2J5 1176 aaKnown RBP12.55□□□□□ -0.4
CMTM1-216ENST00000533078 HSFX1Q9UBD0 423 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 SLC27A5Q9Y2P5 690 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 SPAG17Q6Q759 2223 aa12.55□□□□□ -0.4
CMTM1-216ENST00000533078 NUP210Q8TEM1 1887 aaPredicted RBP12.55□□□□□ -0.4
CMTM1-216ENST00000533078 GREB1Q4ZG55 1949 aa12.54□□□□□ -0.4
CMTM1-216ENST00000533078 MYH11P35749 1972 aa12.54□□□□□ -0.4
CMTM1-216ENST00000533078 MTMR11A4FU01 709 aa12.54□□□□□ -0.4
CMTM1-216ENST00000533078 ABLIM1O14639 778 aa12.54□□□□□ -0.4
CMTM1-216ENST00000533078 AKAP3O75969 853 aa12.54□□□□□ -0.4
CMTM1-216ENST00000533078 ZNF806P0C7X5 589 aa12.54□□□□□ -0.4
CMTM1-216ENST00000533078 SCP2P22307 547 aa12.54□□□□□ -0.4
CMTM1-216ENST00000533078 GUCY2CP25092 1073 aa12.54□□□□□ -0.4
CMTM1-216ENST00000533078 AVPR1AP37288 418 aa12.54□□□□□ -0.4
CMTM1-216ENST00000533078 LIG4P49917 911 aa12.54□□□□□ -0.4
CMTM1-216ENST00000533078 SPAG1Q07617 926 aa12.54□□□□□ -0.4
CMTM1-216ENST00000533078 BFSP1Q12934 665 aa12.54□□□□□ -0.4
CMTM1-216ENST00000533078 MGAT5BQ3V5L5 792 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms