RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 ZNF233A6NK53 670 aa17.97■□□□□ 0.47
PKP3-209ENST00000533069 SYKP43405 635 aa17.97■□□□□ 0.47
PKP3-209ENST00000533069 WNT7BP56706 349 aa17.97■□□□□ 0.47
PKP3-209ENST00000533069 NTHL1P78549 312 aa17.97■□□□□ 0.47
PKP3-209ENST00000533069 ADCY1Q08828 1119 aa17.97■□□□□ 0.47
PKP3-209ENST00000533069 PSMD2Q13200 908 aa17.97■□□□□ 0.47
PKP3-209ENST00000533069 METTL23Q86XA0 190 aa17.97■□□□□ 0.47
PKP3-209ENST00000533069 SUGP1Q8IWZ8 645 aaKnown RBP17.97■□□□□ 0.47
PKP3-209ENST00000533069 GRAMD1CQ8IYS0 662 aa17.97■□□□□ 0.47
PKP3-209ENST00000533069 ELMOD1Q8N336 334 aa17.97■□□□□ 0.47
PKP3-209ENST00000533069 LRRC52Q8N7C0 313 aa17.97■□□□□ 0.47
PKP3-209ENST00000533069 CHAMP1Q96JM3 812 aa17.97■□□□□ 0.47
PKP3-209ENST00000533069 GDPD2Q9HCC8 539 aa17.97■□□□□ 0.47
PKP3-209ENST00000533069 SLC39A2Q9NP94 309 aa17.97■□□□□ 0.47
PKP3-209ENST00000533069 EXOC1Q9NV70 894 aa17.97■□□□□ 0.47
PKP3-209ENST00000533069 DNMT3BQ9UBC3 853 aaKnown RBP17.97■□□□□ 0.47
PKP3-209ENST00000533069 CDH7Q9ULB5 785 aa17.97■□□□□ 0.47
PKP3-209ENST00000533069 KPNA7A9QM74 516 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 CYB561D2O14569 222 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 TGFB1I1O43294 461 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 SEC24AO95486 1093 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 TMEM191BP0C7N4 346 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 PTPN2P17706 415 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 GPR17Q13304 367 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 PLD1Q13393 1074 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 RNF19BQ6ZMZ0 732 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 FBXL6Q8N531 539 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 C1orf127Q8N9H9 656 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 GOLGA5Q8TBA6 731 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 KCNH6Q9H252 994 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 PDE11AQ9HCR9 933 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 HCFC1R1Q9NWW0 138 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 DUSP12Q9UNI6 340 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 C2orf16Q68DN1 1984 aa17.96■□□□□ 0.47
PKP3-209ENST00000533069 MTCL1Q9Y4B5 1905 aaKnown RBP17.96■□□□□ 0.47
PKP3-209ENST00000533069 ANHXE9PGG2 379 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 TULP1O00294 542 aaPredicted RBP17.95■□□□□ 0.46
PKP3-209ENST00000533069 KLRC4O43908 158 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 ITGB3P05106 788 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 RHOP08100 348 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 POLR2BP30876 1174 aaKnown RBP17.95■□□□□ 0.46
PKP3-209ENST00000533069 NDUFA8P51970 172 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 SNRNP35Q16560 246 aaKnown RBP17.95■□□□□ 0.46
PKP3-209ENST00000533069 KNOP1Q1ED39 458 aaKnown RBP17.95■□□□□ 0.46
PKP3-209ENST00000533069 IQCEQ6IPM2 695 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 CBWD2Q8IUF1 395 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 NELFCDQ8IXH7 590 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 C12orf56Q8IXR9 622 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 THEM5Q8N1Q8 247 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 FSIP1Q8NA03 581 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 XXYLT1Q8NBI6 393 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 LEMD2Q8NC56 503 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 FGF13Q92913 245 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 BORCS6Q96GS4 357 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 ANKRD36BP1Q96IX9 119 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 HSFX1Q9UBD0 423 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 RAPGEFL1Q9UHV5 662 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 AGAP1Q9UPQ3 857 aa17.95■□□□□ 0.46
PKP3-209ENST00000533069 MRPS23Q9Y3D9 190 aaKnown RBP17.95■□□□□ 0.46
PKP3-209ENST00000533069 R3HCC1Q9Y3T6 440 aaKnown RBP17.95■□□□□ 0.46
PKP3-209ENST00000533069 OR4Q2P0C623 313 aa17.94■□□□□ 0.46
PKP3-209ENST00000533069 RBP5P82980 135 aa17.94■□□□□ 0.46
PKP3-209ENST00000533069 HTR4Q13639 388 aa17.94■□□□□ 0.46
PKP3-209ENST00000533069 MTSS1LQ765P7 747 aa17.94■□□□□ 0.46
PKP3-209ENST00000533069 WDR49Q8IV35 697 aa17.94■□□□□ 0.46
PKP3-209ENST00000533069 CSGALNACT2Q8N6G5 542 aa17.94■□□□□ 0.46
PKP3-209ENST00000533069 ITFG1Q8TB96 612 aa17.94■□□□□ 0.46
PKP3-209ENST00000533069 CCDC47Q96A33 483 aaKnown RBP17.94■□□□□ 0.46
PKP3-209ENST00000533069 CCDC34Q96HJ3 373 aa17.94■□□□□ 0.46
PKP3-209ENST00000533069 MTMR12Q9C0I1 747 aa17.94■□□□□ 0.46
PKP3-209ENST00000533069 SMOC2Q9H3U7 446 aa17.94■□□□□ 0.46
PKP3-209ENST00000533069 INTS13Q9NVM9 706 aa17.94■□□□□ 0.46
PKP3-209ENST00000533069 GDE1Q9NZC3 331 aa17.94■□□□□ 0.46
PKP3-209ENST00000533069 YIPF1Q9Y548 306 aa17.94■□□□□ 0.46
PKP3-209ENST00000533069 ZNF197O14709 1029 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 MICAL2O94851 1124 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 TNNC2P02585 160 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 TWF1Q12792 350 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 SMARCB1Q12824 385 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 STK4Q13043 487 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 DUOXA2Q1HG44 320 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 KLHL40Q2TBA0 621 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 KMT5BQ4FZB7 885 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 PDZD4Q76G19 769 aaPredicted RBP17.93■□□□□ 0.46
PKP3-209ENST00000533069 NPAS3Q8IXF0 933 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 SLC44A3Q8N4M1 653 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 OR10T2Q8NGX3 314 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 CXorf38Q8TB03 319 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 SYAP1Q96A49 352 aaPredicted RBP17.93■□□□□ 0.46
PKP3-209ENST00000533069 ZNF512Q96ME7 567 aaPredicted RBP17.93■□□□□ 0.46
PKP3-209ENST00000533069 PGLYRP2Q96PD5 576 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 CORO1BQ9BR76 489 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 ANP32EQ9BTT0 268 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 NUMBLQ9Y6R0 609 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 TECTAO75443 2155 aa17.93■□□□□ 0.46
PKP3-209ENST00000533069 MTMR11A4FU01 709 aa17.92■□□□□ 0.46
PKP3-209ENST00000533069 CLIC2O15247 247 aa17.92■□□□□ 0.46
PKP3-209ENST00000533069 HUS1O60921 280 aa17.92■□□□□ 0.46
PKP3-209ENST00000533069 KIF20AO95235 890 aa17.92■□□□□ 0.46
PKP3-209ENST00000533069 VNN2O95498 520 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms