RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 SEMA4AQ9H3S1 761 aa19.3■□□□□ 0.68
PCF11-206ENST00000533018 MRPL44Q9H9J2 332 aaKnown RBP19.3■□□□□ 0.68
PCF11-206ENST00000533018 FOXD4L1Q9NU39 408 aa19.3■□□□□ 0.68
PCF11-206ENST00000533018 TBC1D7Q9P0N9 293 aa19.3■□□□□ 0.68
PCF11-206ENST00000533018 STK17AQ9UEE5 414 aa19.3■□□□□ 0.68
PCF11-206ENST00000533018 FBXO2Q9UK22 296 aaPredicted RBP19.3■□□□□ 0.68
PCF11-206ENST00000533018 SRPRBQ9Y5M8 271 aaKnown RBP19.3■□□□□ 0.68
PCF11-206ENST00000533018 SCN1AP35498 2009 aa19.3■□□□□ 0.68
PCF11-206ENST00000533018 ZNF292O60281 2723 aa19.3■□□□□ 0.68
PCF11-206ENST00000533018 NRG2O14511 850 aaPredicted RBP19.29■□□□□ 0.68
PCF11-206ENST00000533018 NCAM2O15394 837 aa19.29■□□□□ 0.68
PCF11-206ENST00000533018 SYT1P21579 422 aa19.29■□□□□ 0.68
PCF11-206ENST00000533018 FCARP24071 287 aa19.29■□□□□ 0.68
PCF11-206ENST00000533018 GDI1P31150 447 aa19.29■□□□□ 0.68
PCF11-206ENST00000533018 VIPR2P41587 438 aa19.29■□□□□ 0.68
PCF11-206ENST00000533018 TEAD2Q15562 447 aa19.29■□□□□ 0.68
PCF11-206ENST00000533018 SV2BQ7L1I2 683 aa19.29■□□□□ 0.68
PCF11-206ENST00000533018 ZNF720Q7Z2F6 126 aa19.29■□□□□ 0.68
PCF11-206ENST00000533018 NELL2Q99435 816 aa19.29■□□□□ 0.68
PCF11-206ENST00000533018 HINFPQ9BQA5 517 aa19.29■□□□□ 0.68
PCF11-206ENST00000533018 OSBPL6Q9BZF3 934 aa19.29■□□□□ 0.68
PCF11-206ENST00000533018 IKZF4Q9H2S9 585 aa19.29■□□□□ 0.68
PCF11-206ENST00000533018 CRISPLD1Q9H336 500 aa19.29■□□□□ 0.68
PCF11-206ENST00000533018 ASB7Q9H672 318 aa19.29■□□□□ 0.68
PCF11-206ENST00000533018 MRPS17Q9Y2R5 130 aaKnown RBP19.29■□□□□ 0.68
PCF11-206ENST00000533018 DERAQ9Y315 318 aa19.29■□□□□ 0.68
PCF11-206ENST00000533018 A0A1W2PRU2 124 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 PIRO00625 290 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 SPTLC1O15269 473 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 IDEP14735 1019 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 PSMC3P17980 439 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 PAX3P23760 479 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 CDR1P51861 262 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 RESTQ13127 1097 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 MYBPC2Q14324 1141 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 CENPPQ6IPU0 288 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 METTL23Q86XA0 190 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 ATAD1Q8NBU5 361 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 SHKBP1Q8TBC3 707 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 DNASE1L2Q92874 299 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 IRF7Q92985 503 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 TMEM209Q96SK2 561 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 PYM1Q9BRP8 204 aaKnown RBP19.28■□□□□ 0.68
PCF11-206ENST00000533018 PANK2Q9BZ23 570 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 GPR88Q9GZN0 384 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 ST6GALNAC4Q9H4F1 302 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 DPP3Q9NY33 737 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 NDRG2Q9UN36 371 aaKnown RBP19.28■□□□□ 0.68
PCF11-206ENST00000533018 F5P12259 2224 aa19.28■□□□□ 0.68
PCF11-206ENST00000533018 TICRRQ7Z2Z1 1910 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 MTMR11A4FU01 709 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 MYMKA6NI61 221 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 MOSPD3O75425 235 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 SOAT2O75908 522 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 VNN2O95498 520 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 TARSP26639 723 aaKnown RBP19.27■□□□□ 0.68
PCF11-206ENST00000533018 STAT6P42226 847 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 TAF6P49848 677 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 EPHA5P54756 1037 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 CSTF1Q05048 431 aaKnown RBP19.27■□□□□ 0.68
PCF11-206ENST00000533018 POSTNQ15063 836 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 SLC39A12Q504Y0 691 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 VITQ6UXI7 678 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 YAF2Q8IY57 180 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 THEM5Q8N1Q8 247 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 FAM200AQ8TCP9 573 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 SEPT5Q99719 369 aaPredicted RBP19.27■□□□□ 0.68
PCF11-206ENST00000533018 DSEQ9UL01 958 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 EXOC7Q9UPT5 735 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 C2CD2Q9Y426 696 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 STYXL1Q9Y6J8 313 aa19.27■□□□□ 0.68
PCF11-206ENST00000533018 PATJQ8NI35 1801 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 FANCMQ8IYD8 2048 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 MAN2B1O00754 1011 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 CYB561D2O14569 222 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 ZNF263O14978 683 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 GCNT3O95395 438 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 GAP43P17677 238 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 MAGEA9P43362 315 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 MGAT5BQ3V5L5 792 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 CCDC73Q6ZRK6 1079 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 GPIHBP1Q8IV16 184 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 MAML2Q8IZL2 1156 aaPredicted RBP19.26■□□□□ 0.67
PCF11-206ENST00000533018 SYCP3Q8IZU3 236 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 NOC3LQ8WTT2 800 aaKnown RBP19.26■□□□□ 0.67
PCF11-206ENST00000533018 DEPDC1BQ8WUY9 529 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 HVCN1Q96D96 273 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 ACCSQ96QU6 501 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 FAM213AQ9BRX8 229 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 DNAJC25Q9H1X3 360 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 ZNF334Q9HCZ1 680 aaPredicted RBP19.26■□□□□ 0.67
PCF11-206ENST00000533018 SEL1LQ9UBV2 794 aa19.26■□□□□ 0.67
PCF11-206ENST00000533018 ANO9A1A5B4 782 aa19.25■□□□□ 0.67
PCF11-206ENST00000533018 HEPACAM2A8MVW5 462 aa19.25■□□□□ 0.67
PCF11-206ENST00000533018 KINO60870 393 aaKnown RBP19.25■□□□□ 0.67
PCF11-206ENST00000533018 KCNA1Q09470 495 aa19.25■□□□□ 0.67
PCF11-206ENST00000533018 DNAJB7Q7Z6W7 309 aaPredicted RBP19.25■□□□□ 0.67
PCF11-206ENST00000533018 ITIH5Q86UX2 942 aa19.25■□□□□ 0.67
PCF11-206ENST00000533018 MFSD6LQ8IWD5 586 aa19.25■□□□□ 0.67
PCF11-206ENST00000533018 TTC9BQ8N6N2 239 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms