RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 VARS2Q5ST30 1063 aaKnown RBP12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 SPOPLQ6IQ16 392 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 SEMA4DQ92854 862 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 TLE6Q9H808 572 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 MAGEC2Q9UBF1 373 aaPredicted RBP12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 NXF1Q9UBU9 619 aaKnown RBP12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 IRAK3Q9Y616 596 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 KCNJ18B7U540 433 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 ODC1P11926 461 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 FMO5P49326 533 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 KCNJ12Q14500 433 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 PSMD5Q16401 504 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 ZNF699Q32M78 642 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 WSCD1Q658N2 575 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 RSPO2Q6UXX9 243 aaPredicted RBP12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 FAM114A1Q8IWE2 563 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 DHX40Q8IX18 779 aaKnown RBP12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 APPL2Q8NEU8 664 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 PIK3R5Q8WYR1 880 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 MMS19Q96T76 1030 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 RRAGDQ9NQL2 400 aaPredicted RBP12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 GDAP2Q9NXN4 497 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 POLIQ9UNA4 740 aa12.81□□□□□ -0.36
TRAF3IP2-212ENST00000532708 TEX28O15482 410 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 ADAM12O43184 909 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 ATICP31939 592 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 RBM10P98175 930 aaKnown RBP12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 YWHAHQ04917 246 aaPredicted RBP12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 HYAL1Q12794 435 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 SOWAHAQ2M3V2 549 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 SGSM1Q2NKQ1 1148 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 TCP11X2Q5H9J9 407 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 ANKS3Q6ZW76 656 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 FBXL13Q8NEE6 735 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 KLHL5Q96PQ7 755 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 BPIFA3Q9BQP9 254 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 RAB20Q9NX57 234 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 L1RE1Q9UN81 338 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 SSX2IPQ9Y2D8 614 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 HUS1O60921 280 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 AFPP02771 609 aaKnown RBP12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 PAX3P23760 479 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 KLRC2P26717 231 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 CDR1P51861 262 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 MYL7Q01449 175 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 MRPL58Q14197 206 aaKnown RBP12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 CTXN3Q4LDR2 81 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 CDKAL1Q5VV42 579 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 OVOS1Q6IE37 1185 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 PALB2Q86YC2 1186 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 PDCL2Q8N4E4 241 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 CLSTN3Q9BQT9 956 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 TUBGCP2Q9BSJ2 902 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 EMILIN2Q9BXX0 1053 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 HSD3B7Q9H2F3 369 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 RXFP1Q9HBX9 757 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 CBX8Q9HC52 389 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 CDY1Q9Y6F8 540 aa12.8□□□□□ -0.36
TRAF3IP2-212ENST00000532708 LINC01565O15544 149 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 CLASP2O75122 1294 aaKnown RBP12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 ASS1P00966 412 aaKnown RBP12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 CYP11A1P05108 521 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 TYMPP19971 482 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 OR1D2P34982 312 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 CDH8P55286 799 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 ARPP19P56211 112 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 TNNC1P63316 161 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 IQCB1Q15051 598 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 ZNF667Q5HYK9 610 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 LLGL2Q6P1M3 1020 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 SCARA5Q6ZMJ2 495 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 LUZP1Q86V48 1076 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 METTL23Q86XA0 190 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 PPP2R3CQ969Q6 453 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 APOBEC3GQ9HC16 384 aaKnown RBP12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 TAB2Q9NYJ8 693 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 MTRRQ9UBK8 725 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 FBXL5Q9UKA1 691 aa12.79□□□□□ -0.36
TRAF3IP2-212ENST00000532708 BECN2A8MW95 431 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 PES1O00541 588 aaKnown RBP12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 HCRTO43612 131 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 TBC1D4O60343 1298 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 OAZ2O95190 189 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 STAU1O95793 577 aaKnown RBP12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 SPATA31D3P0C874 917 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 EEF1GP26641 437 aaKnown RBP12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 RAP1GAPP47736 663 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 LRMPQ12912 555 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 SKIV2LQ15477 1246 aaKnown RBP12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 MAN2A1Q16706 1144 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 DUSP6Q16828 381 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 PDXDC1Q6P996 788 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 LRSAM1Q6UWE0 723 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 EP400NLQ6ZTU2 488 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 SPATA31D4Q6ZUB0 917 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 MAFAQ8NHW3 353 aaPredicted RBP12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 TATDN2Q93075 761 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 TMEM209Q96SK2 561 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 RTP3Q9BQQ7 232 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 MRPL45Q9BRJ2 306 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms