RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 BRSK2Q8IWQ3 736 aa19.27■□□□□ 0.68
SMG1-203ENST00000532700 ATAD1Q8NBU5 361 aa19.27■□□□□ 0.68
SMG1-203ENST00000532700 LRRC3Q9BY71 257 aa19.27■□□□□ 0.68
SMG1-203ENST00000532700 TNMDQ9H2S6 317 aa19.27■□□□□ 0.68
SMG1-203ENST00000532700 OBSL1O75147 1896 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 TICRRQ7Z2Z1 1910 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 MYO15AQ9UKN7 3530 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 POLR2DO15514 142 aaKnown RBP19.26■□□□□ 0.67
SMG1-203ENST00000532700 XPOTO43592 962 aaKnown RBP19.26■□□□□ 0.67
SMG1-203ENST00000532700 GALR2O43603 387 aaPredicted RBP19.26■□□□□ 0.67
SMG1-203ENST00000532700 HCRTO43612 131 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 LRRN2O75325 713 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 PTPN2P17706 415 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 AOC1P19801 751 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 TYMPP19971 482 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 ELF1P32519 619 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 ABCD1P33897 745 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 PTPN5P54829 565 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 EHHADHQ08426 723 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 DUSP4Q13115 394 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 RESP18Q5W5W9 173 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 WSCD1Q658N2 575 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 EPM2AIP1Q7L775 607 aaPredicted RBP19.26■□□□□ 0.67
SMG1-203ENST00000532700 LRRTM3Q86VH5 581 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 TMC8Q8IU68 726 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 C1orf127Q8N9H9 656 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 NOC3LQ8WTT2 800 aaKnown RBP19.26■□□□□ 0.67
SMG1-203ENST00000532700 TSPAN18Q96SJ8 248 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 PYM1Q9BRP8 204 aaKnown RBP19.26■□□□□ 0.67
SMG1-203ENST00000532700 TBC1D17Q9HA65 648 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 PDE11AQ9HCR9 933 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 AVENQ9NQS1 362 aaPredicted RBP19.26■□□□□ 0.67
SMG1-203ENST00000532700 SLC2A4RGQ9NR83 387 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 WNT16Q9UBV4 365 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 KCNH3Q9ULD8 1083 aa19.26■□□□□ 0.67
SMG1-203ENST00000532700 TULP1O00294 542 aaPredicted RBP19.25■□□□□ 0.67
SMG1-203ENST00000532700 CYP11A1P05108 521 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 ODC1P11926 461 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 CLCN5P51795 746 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 ASIC1P78348 528 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 TFAMQ00059 246 aaKnown RBP19.25■□□□□ 0.67
SMG1-203ENST00000532700 GPR17Q13304 367 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 STXBP5Q5T5C0 1151 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 TANGO2Q6ICL3 276 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 CENPPQ6IPU0 288 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 RTL10Q7L3V2 364 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 CBWD2Q8IUF1 395 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 CCDC65Q8IXS2 484 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 SYCP3Q8IZU3 236 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 NXPE3Q969Y0 559 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 FOXQ1Q9C009 403 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 ZNF334Q9HCZ1 680 aaPredicted RBP19.25■□□□□ 0.67
SMG1-203ENST00000532700 RBAKQ9NYW8 714 aaPredicted RBP19.25■□□□□ 0.67
SMG1-203ENST00000532700 SIX4Q9UIU6 781 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 EXOC7Q9UPT5 735 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 PCDHB13Q9Y5F0 798 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 ZFP37Q9Y6Q3 630 aaPredicted RBP19.25■□□□□ 0.67
SMG1-203ENST00000532700 MIA3Q5JRA6 1907 aa19.25■□□□□ 0.67
SMG1-203ENST00000532700 PATJQ8NI35 1801 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 SHISA7A6NL88 538 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 CYB561D2O14569 222 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 TGFB1I1O43294 461 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 ITGB3P05106 788 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 MYL4P12829 197 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 GARTP22102 1010 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 POLR2BP30876 1174 aaKnown RBP19.24■□□□□ 0.67
SMG1-203ENST00000532700 ME1P48163 572 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 EPHA5P54756 1037 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 CUL4BQ13620 913 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 POSTNQ15063 836 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 FAM78AQ5JUQ0 283 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 USP37Q86T82 979 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 STKLD1Q8NE28 680 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 OR5B17Q8NGF7 314 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 SHKBP1Q8TBC3 707 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 RSPRY1Q96DX4 576 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 C7orf25Q9BPX7 421 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 ARHGEF3Q9NR81 526 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 TMLHEQ9NVH6 421 aa19.24■□□□□ 0.67
SMG1-203ENST00000532700 DMDP11532 3685 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 USP34Q70CQ2 3546 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 OR6C75A6NL08 312 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 EXTL3O43909 919 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 IL18RAPO95256 599 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 GLULP15104 373 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 AFMP43652 599 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 TAF6P49848 677 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 SNW1Q13573 536 aaKnown RBP19.23■□□□□ 0.67
SMG1-203ENST00000532700 TEAD2Q15562 447 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 CNNM4Q6P4Q7 775 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 GPIHBP1Q8IV16 184 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 LPIN3Q9BQK8 851 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 MTMR12Q9C0I1 747 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 ZCWPW1Q9H0M4 648 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 GZF1Q9H116 711 aaPredicted RBP19.23■□□□□ 0.67
SMG1-203ENST00000532700 SERTAD1Q9UHV2 236 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 RCOR1Q9UKL0 485 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 MTF2Q9Y483 593 aaPredicted RBP19.23■□□□□ 0.67
SMG1-203ENST00000532700 DENND4CQ5VZ89 1909 aa19.23■□□□□ 0.67
SMG1-203ENST00000532700 NUP210Q8TEM1 1887 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms