RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 KBTBD4Q9NVX7 518 aa20.51■□□□□ 0.87
SSH3-209ENST00000532600 CHMP5Q9NZZ3 219 aa20.51■□□□□ 0.87
SSH3-209ENST00000532600 CFAP45Q9UL16 551 aa20.51■□□□□ 0.87
SSH3-209ENST00000532600 MAFFQ9ULX9 164 aa20.51■□□□□ 0.87
SSH3-209ENST00000532600 YIPF1Q9Y548 306 aa20.51■□□□□ 0.87
SSH3-209ENST00000532600 USP34Q70CQ2 3546 aa20.51■□□□□ 0.87
SSH3-209ENST00000532600 PRPF6O94906 941 aaKnown RBP20.5■□□□□ 0.87
SSH3-209ENST00000532600 HOXD13P35453 343 aa20.5■□□□□ 0.87
SSH3-209ENST00000532600 KRT85P78386 507 aa20.5■□□□□ 0.87
SSH3-209ENST00000532600 GPR17Q13304 367 aa20.5■□□□□ 0.87
SSH3-209ENST00000532600 MTSS1LQ765P7 747 aa20.5■□□□□ 0.87
SSH3-209ENST00000532600 CCDC105Q8IYK2 499 aa20.5■□□□□ 0.87
SSH3-209ENST00000532600 TTC9BQ8N6N2 239 aa20.5■□□□□ 0.87
SSH3-209ENST00000532600 KCNG4Q8TDN1 519 aa20.5■□□□□ 0.87
SSH3-209ENST00000532600 CBWD1Q9BRT8 395 aa20.5■□□□□ 0.87
SSH3-209ENST00000532600 FAM213AQ9BRX8 229 aa20.5■□□□□ 0.87
SSH3-209ENST00000532600 DNAJC25Q9H1X3 360 aa20.5■□□□□ 0.87
SSH3-209ENST00000532600 ARHGEF3Q9NR81 526 aa20.5■□□□□ 0.87
SSH3-209ENST00000532600 DPP3Q9NY33 737 aa20.5■□□□□ 0.87
SSH3-209ENST00000532600 GDE1Q9NZC3 331 aa20.5■□□□□ 0.87
SSH3-209ENST00000532600 PCDHA7Q9UN72 937 aa20.5■□□□□ 0.87
SSH3-209ENST00000532600 ATP6V1DQ9Y5K8 247 aa20.5■□□□□ 0.87
SSH3-209ENST00000532600 MYO15AQ9UKN7 3530 aa20.5■□□□□ 0.87
SSH3-209ENST00000532600 OR6C75A6NL08 312 aa20.49■□□□□ 0.87
SSH3-209ENST00000532600 CYP11A1P05108 521 aa20.49■□□□□ 0.87
SSH3-209ENST00000532600 EPHA5P54756 1037 aa20.49■□□□□ 0.87
SSH3-209ENST00000532600 POSTNQ15063 836 aa20.49■□□□□ 0.87
SSH3-209ENST00000532600 TANGO2Q6ICL3 276 aa20.49■□□□□ 0.87
SSH3-209ENST00000532600 CENPPQ6IPU0 288 aa20.49■□□□□ 0.87
SSH3-209ENST00000532600 USP37Q86T82 979 aa20.49■□□□□ 0.87
SSH3-209ENST00000532600 ATAD1Q8NBU5 361 aa20.49■□□□□ 0.87
SSH3-209ENST00000532600 CXorf38Q8TB03 319 aa20.49■□□□□ 0.87
SSH3-209ENST00000532600 ATOH1Q92858 354 aaPredicted RBP20.49■□□□□ 0.87
SSH3-209ENST00000532600 ZSWIM3Q96MP5 696 aa20.49■□□□□ 0.87
SSH3-209ENST00000532600 TRIM9Q9C026 710 aa20.49■□□□□ 0.87
SSH3-209ENST00000532600 TNMDQ9H2S6 317 aa20.49■□□□□ 0.87
SSH3-209ENST00000532600 DLGAP2Q9P1A6 1054 aa20.49■□□□□ 0.87
SSH3-209ENST00000532600 PCDHB13Q9Y5F0 798 aa20.49■□□□□ 0.87
SSH3-209ENST00000532600 MTMR11A4FU01 709 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 GOLGA8IPA6NC78 632 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 GOLGA8JA6NMD2 632 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 CUTAO60888 179 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 ODC1P11926 461 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 GJA1P17302 382 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 CDR1P51861 262 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 DUSP4Q13115 394 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 MYBPC2Q14324 1141 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 FAM78AQ5JUQ0 283 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 PHLDB3Q6NSJ2 640 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 TMC8Q8IU68 726 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 BRSK2Q8IWQ3 736 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 DTWD2Q8NBA8 298 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 DHX58Q96C10 678 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 OXCT2Q9BYC2 517 aaPredicted RBP20.48■□□□□ 0.87
SSH3-209ENST00000532600 EXOC7Q9UPT5 735 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 SLC27A5Q9Y2P5 690 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 DMDP11532 3685 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 ZFHX2Q9C0A1 2572 aaPredicted RBP20.48■□□□□ 0.87
SSH3-209ENST00000532600 NCANO14594 1321 aa20.48■□□□□ 0.87
SSH3-209ENST00000532600 TCHHQ07283 1943 aa20.47■□□□□ 0.87
SSH3-209ENST00000532600 ECI2O75521 394 aa20.47■□□□□ 0.87
SSH3-209ENST00000532600 SOAT2O75908 522 aa20.47■□□□□ 0.87
SSH3-209ENST00000532600 MICAL2O94851 1124 aa20.47■□□□□ 0.87
SSH3-209ENST00000532600 IL18RAPO95256 599 aa20.47■□□□□ 0.87
SSH3-209ENST00000532600 GARTP22102 1010 aa20.47■□□□□ 0.87
SSH3-209ENST00000532600 STARD6P59095 220 aa20.47■□□□□ 0.87
SSH3-209ENST00000532600 SNW1Q13573 536 aaKnown RBP20.47■□□□□ 0.87
SSH3-209ENST00000532600 PDZD4Q76G19 769 aaPredicted RBP20.47■□□□□ 0.87
SSH3-209ENST00000532600 SPATA32Q96LK8 384 aa20.47■□□□□ 0.87
SSH3-209ENST00000532600 FOXQ1Q9C009 403 aa20.47■□□□□ 0.87
SSH3-209ENST00000532600 PCIF1Q9H4Z3 704 aa20.47■□□□□ 0.87
SSH3-209ENST00000532600 COL4A2P08572 1712 aa20.47■□□□□ 0.87
SSH3-209ENST00000532600 SHISA7A6NL88 538 aa20.46■□□□□ 0.87
SSH3-209ENST00000532600 CYB561D2O14569 222 aa20.46■□□□□ 0.87
SSH3-209ENST00000532600 LRRN2O75325 713 aa20.46■□□□□ 0.87
SSH3-209ENST00000532600 GLULP15104 373 aa20.46■□□□□ 0.87
SSH3-209ENST00000532600 PAX3P23760 479 aa20.46■□□□□ 0.87
SSH3-209ENST00000532600 CASP1P29466 404 aa20.46■□□□□ 0.87
SSH3-209ENST00000532600 ME1P48163 572 aa20.46■□□□□ 0.87
SSH3-209ENST00000532600 TAF6P49848 677 aa20.46■□□□□ 0.87
SSH3-209ENST00000532600 ALCAMQ13740 583 aa20.46■□□□□ 0.87
SSH3-209ENST00000532600 WSCD1Q658N2 575 aa20.46■□□□□ 0.87
SSH3-209ENST00000532600 CNNM4Q6P4Q7 775 aa20.46■□□□□ 0.87
SSH3-209ENST00000532600 LRRTM3Q86VH5 581 aa20.46■□□□□ 0.87
SSH3-209ENST00000532600 CCDC65Q8IXS2 484 aa20.46■□□□□ 0.87
SSH3-209ENST00000532600 C1orf127Q8N9H9 656 aa20.46■□□□□ 0.87
SSH3-209ENST00000532600 SHKBP1Q8TBC3 707 aa20.46■□□□□ 0.87
SSH3-209ENST00000532600 ZNF512Q96ME7 567 aaPredicted RBP20.46■□□□□ 0.87
SSH3-209ENST00000532600 PYM1Q9BRP8 204 aaKnown RBP20.46■□□□□ 0.87
SSH3-209ENST00000532600 DDX23Q9BUQ8 820 aaKnown RBP20.46■□□□□ 0.87
SSH3-209ENST00000532600 ZCWPW1Q9H0M4 648 aa20.46■□□□□ 0.87
SSH3-209ENST00000532600 RBAKQ9NYW8 714 aaPredicted RBP20.46■□□□□ 0.87
SSH3-209ENST00000532600 STK25O00506 426 aa20.45■□□□□ 0.86
SSH3-209ENST00000532600 ZNF197O14709 1029 aa20.45■□□□□ 0.86
SSH3-209ENST00000532600 EXTL3O43909 919 aa20.45■□□□□ 0.86
SSH3-209ENST00000532600 DCNP07585 359 aaKnown RBP20.45■□□□□ 0.86
SSH3-209ENST00000532600 MYL4P12829 197 aa20.45■□□□□ 0.86
SSH3-209ENST00000532600 EHHADHQ08426 723 aa20.45■□□□□ 0.86
SSH3-209ENST00000532600 SLC44A4Q53GD3 710 aa20.45■□□□□ 0.86
SSH3-209ENST00000532600 IQCEQ6IPM2 695 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms