RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	ANKRD36BP1	Q96IX9	119 aa		18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	PGLYRP2	Q96PD5	576 aa		18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	FNBP1	Q96RU3	617 aa		18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	RTP3	Q9BQQ7	232 aa		18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	CYP4F11	Q9HBI6	524 aa		18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	PI4K2B	G5E9Z4	385 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	PRRG1	O14668	218 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	TNNC2	P02585	160 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	CYP11A1	P05108	521 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	HNRNPA1	P09651	372 aa	Known RBP eCLIP	18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	CPB1	P15086	417 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	TNNI1	P19237	187 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	PAX3	P23760	479 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	PNPLA4	P41247	253 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	ADCY1	Q08828	1119 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	BFSP1	Q12934	665 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	UVSSA	Q2YD98	709 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	CYP26C1	Q6V0L0	522 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	TRAPPC11	Q7Z392	1133 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	GRASP	Q7Z6J2	395 aa	Predicted RBP	18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	SLC9A9	Q8IVB4	645 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	GUF1	Q8N442	669 aa	Known RBP	18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	SPATA20	Q8TB22	786 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	TMEM174	Q8WUU8	243 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	ZNF560	Q96MR9	790 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	CGRRF1	Q99675	332 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	RHOBTB2	Q9BYZ6	727 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	POLI	Q9UNA4	740 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	TRAF3IP3	Q9Y228	551 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	NR2E1	Q9Y466	385 aa		18.77	■□□□□ 0.6
CTSB-223	ENST00000532370	CLUH	O75153	1309 aa		18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	PLXNA3	P51805	1871 aa		18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	OR6C75	A6NL08	312 aa		18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	CST3	P01034	146 aa	Predicted RBP	18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	ELF1	P32519	619 aa		18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	TPGS2	Q68CL5	300 aa		18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	TCEAL8	Q8IYN2	117 aa		18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	PDCL2	Q8N4E4	241 aa		18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	LRRC52	Q8N7C0	313 aa		18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	TDRD5	Q8NAT2	981 aa	Known RBP	18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	SMARCE1	Q969G3	411 aa		18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	CRISPLD1	Q9H336	500 aa		18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	HCFC1R1	Q9NWW0	138 aa		18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	LIMD1	Q9UGP4	676 aa		18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	AFF4	Q9UHB7	1163 aa	Known RBP	18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	DSE	Q9UL01	958 aa		18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	L1RE1	Q9UN81	338 aa		18.76	■□□□□ 0.59
CTSB-223	ENST00000532370	DCX	O43602	365 aa		18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	CALU	O43852	315 aa	Predicted RBP	18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	KIN	O60870	393 aa	Known RBP	18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	PRPF40A	O75400	957 aa	Known RBP	18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	KIF20A	O95235	890 aa		18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	SMC2	O95347	1197 aa		18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	HOXA9	P31269	272 aa		18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	PRCP	P42785	496 aa		18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	DLG4	P78352	724 aa		18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	CEP135	Q66GS9	1140 aa		18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	ISM2	Q6H9L7	571 aa		18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	METTL23	Q86XA0	190 aa		18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	ATAD1	Q8NBU5	361 aa		18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	HPDL	Q96IR7	371 aa		18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	GSDMA	Q96QA5	445 aa		18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	RMND1	Q9NWS8	449 aa		18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	UST	Q9Y2C2	406 aa		18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	SNX9	Q9Y5X1	595 aa		18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	PDCD11	Q14690	1871 aa	Known RBP	18.75	■□□□□ 0.59
CTSB-223	ENST00000532370	ARHGEF37	A1IGU5	675 aa		18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	LRRIQ3	A6PVS8	624 aa	Predicted RBP	18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	XYLB	O75191	536 aa		18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	ASGR2	P07307	311 aa		18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	NR2F2	P24468	414 aa		18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	GPR17	Q13304	367 aa		18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	MYBPC2	Q14324	1141 aa		18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	ZCWPW2	Q504Y3	356 aa		18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	ZNF658	Q5TYW1	1059 aa	Predicted RBP	18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	OTOP3	Q7RTS5	596 aa		18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	LRRTM3	Q86VH5	581 aa		18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	PARD3B	Q8TEW8	1205 aa		18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	EEF2KMT	Q96G04	330 aa		18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	MYADM	Q96S97	322 aa		18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	OXCT2	Q9BYC2	517 aa	Predicted RBP	18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	GDAP2	Q9NXN4	497 aa		18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	DNMT3B	Q9UBC3	853 aa	Known RBP	18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	HOOK1	Q9UJC3	728 aa	Known RBP	18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	SLC27A5	Q9Y2P5	690 aa		18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	INSL5	Q9Y5Q6	135 aa		18.74	■□□□□ 0.59
CTSB-223	ENST00000532370	FAM86C2P	A6NEL3	165 aa		18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	HCRT	O43612	131 aa		18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	HUS1	O60921	280 aa		18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	AKAP3	O75969	853 aa		18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	GBP2	P32456	591 aa	Predicted RBP	18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	UBE2H	P62256	183 aa		18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	DUSP4	Q13115	394 aa		18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	SOWAHA	Q2M3V2	549 aa		18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	SLC39A12	Q504Y0	691 aa		18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	RTL10	Q7L3V2	364 aa		18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	GET4	Q7L5D6	327 aa	Predicted RBP	18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	OSTM1	Q86WC4	334 aa		18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	ELOA2	Q8IYF1	753 aa	Predicted RBP	18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	ZDHHC14	Q8IZN3	488 aa		18.73	■□□□□ 0.59

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