RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 AGO3Q9H9G7 860 aaKnown RBP3.59□□□□□ -1.83
CD44-234ENST00000531873 AS3MTQ9HBK9 375 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 GPR35Q9HC97 309 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 MRPS18AQ9NVS2 196 aaKnown RBP3.59□□□□□ -1.83
CD44-234ENST00000531873 CFAP97Q9P2B7 532 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 NCDNQ9UBB6 729 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 GRHPRQ9UBQ7 328 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 RGS17Q9UGC6 210 aaPredicted RBP3.59□□□□□ -1.83
CD44-234ENST00000531873 AGAP1Q9UPQ3 857 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 LZTS1Q9Y250 596 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 NR2E1Q9Y466 385 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 SLC4A7Q9Y6M7 1214 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 SETD1BQ9UPS6 1966 aaKnown RBP3.59□□□□□ -1.83
CD44-234ENST00000531873 UBE2QL1A1L167 161 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 CDHR4A6H8M9 788 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 MBD3L4A6NDZ8 208 aaPredicted RBP3.58□□□□□ -1.84
CD44-234ENST00000531873 MBD3L3A6NE82 208 aaPredicted RBP3.58□□□□□ -1.84
CD44-234ENST00000531873 ZNF785A8K8V0 405 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 E9PLN8 166 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 PYCARD-AS1I3L0S3 204 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 M0R3H8 397 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 NPC1O15118 1278 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 FFAR2O15552 330 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 SKAP2O75563 359 aaPredicted RBP3.58□□□□□ -1.84
CD44-234ENST00000531873 CNOT4O95628 575 aaKnown RBP3.58□□□□□ -1.84
CD44-234ENST00000531873 NDST3O95803 873 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 SRGNP10124 158 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 KLRC1P26715 233 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 CARSP49589 748 aaKnown RBP3.58□□□□□ -1.84
CD44-234ENST00000531873 PPM1FP49593 454 aaPredicted RBP3.58□□□□□ -1.84
CD44-234ENST00000531873 ZNF135P52742 658 aaPredicted RBP3.58□□□□□ -1.84
CD44-234ENST00000531873 PSMC1P62191 440 aaKnown RBP3.58□□□□□ -1.84
CD44-234ENST00000531873 PTH1RQ03431 593 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 RAB32Q13637 225 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 ATP2B3Q16720 1220 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 SPATS1Q496A3 300 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 DCAF12L1Q5VU92 463 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 LIN54Q6MZP7 749 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 PGBD2Q6P3X8 592 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 CATSPERGQ6ZRH7 1159 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 UNC13DQ70J99 1090 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 XYLT1Q86Y38 959 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 PDSS2Q86YH6 399 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 GPR135Q8IZ08 494 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 TXLNBQ8N3L3 684 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 TP53I13Q8NBR0 393 aaPredicted RBP3.58□□□□□ -1.84
CD44-234ENST00000531873 TMIEQ8NEW7 156 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 CYP2W1Q8TAV3 490 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 ZNF566Q969W8 418 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 RMDN3Q96TC7 470 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 VKORC1Q9BQB6 163 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 TMEM120AQ9BXJ8 343 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 ZNF518BQ9C0D4 1074 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 MAGEH1Q9H213 219 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 CHST8Q9H2A9 424 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 BRD9Q9H8M2 597 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 SERHLQ9NQF3 203 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 FAM30AQ9NZY2 134 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 PNMA2Q9UL42 364 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 SLC39A10Q9ULF5 831 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 CNOT6Q9ULM6 557 aaKnown RBP3.58□□□□□ -1.84
CD44-234ENST00000531873 MAGED2Q9UNF1 606 aaPredicted RBP3.58□□□□□ -1.84
CD44-234ENST00000531873 GTF2A1LQ9UNN4 478 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 MAN2B2Q9Y2E5 1009 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 ZDHHC9Q9Y397 364 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 KCTD3Q9Y597 815 aa3.58□□□□□ -1.84
CD44-234ENST00000531873 FAM234BA2RU67 622 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 GOLGA6L3A6NEY3 463 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 OTOL1A6NHN0 477 aaPredicted RBP3.57□□□□□ -1.84
CD44-234ENST00000531873 LGALS16A8MUM7 142 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 B5MCH6 92 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 M0QYG6 137 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 SYT5O00445 386 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 ACKR2O00590 384 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 HOXA3O43365 443 aaPredicted RBP3.57□□□□□ -1.84
CD44-234ENST00000531873 SUV39H1O43463 412 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 TBC1D4O60343 1298 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 B4GALT3O60512 393 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 AMHP03971 560 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 SNRPA1P09661 255 aaKnown RBP3.57□□□□□ -1.84
CD44-234ENST00000531873 TXNP10599 105 aaKnown RBP3.57□□□□□ -1.84
CD44-234ENST00000531873 PIM1P11309 404 aaPredicted RBP3.57□□□□□ -1.84
CD44-234ENST00000531873 CD53P19397 219 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 SLC6A2P23975 617 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 GABRB3P28472 473 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 CCT5P48643 541 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 PTTG1IPP53801 180 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 NPEPPSP55786 919 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 UCP3P55916 312 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 CLRN1P58418 232 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 RAP2BP61225 183 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 TCF15Q12870 199 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 BIRC3Q13489 604 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 PFKFB4Q16877 469 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 BMT2Q1RMZ1 405 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 ZACNQ401N2 412 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 ALFQ53S48 1182 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 RRAGBQ5VZM2 374 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 LMBRD2Q68DH5 695 aaPredicted RBP3.57□□□□□ -1.84
CD44-234ENST00000531873 GGT6Q6P531 493 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms