RNA–Protein interactions for RNA: ENST00000531598.6

NPIPA3-202, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPA3, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-202ENST00000531598 JADE1Q6IE81 842 aa10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 PLEKHA7Q6IQ23 1121 aa10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 SESTD1Q86VW0 696 aa10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 UNC93AQ86WB7 457 aa10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 PALB2Q86YC2 1186 aa10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 C1orf127Q8N9H9 656 aa10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 PCSK9Q8NBP7 692 aaKnown RBP10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 HPDLQ96IR7 371 aa10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 RNPC3Q96LT9 517 aaKnown RBP10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 PNKPQ96T60 521 aa10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 GPBP1L1Q9HC44 474 aaPredicted RBP10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 MED4Q9NPJ6 270 aa10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 FAM114A2Q9NRY5 505 aa10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 RBM12Q9NTZ6 932 aaKnown RBP10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 DPP3Q9NY33 737 aa10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 CNTN3Q9P232 1028 aa10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 PARP2Q9UGN5 583 aa10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 ANAPC7Q9UJX3 599 aa10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 BARX2Q9UMQ3 279 aaPredicted RBP10.29□□□□□ -0.76
NPIPA3-202ENST00000531598 TTLL13PA6NNM8 815 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 PODXLO00592 558 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 PROSCO94903 275 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 ITGB3P05106 788 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 GJB1P08034 283 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 WEE2P0C1S8 567 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 IQCF3P0C7M6 154 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 CYBAP13498 195 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 COMTP21964 271 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 CST5P28325 142 aaPredicted RBP10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 PSMC4P43686 418 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 WNT7BP56706 349 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 PIGHQ14442 188 aaPredicted RBP10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 ACAP1Q15027 740 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 CNGA2Q16280 664 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 KIZQ2M2Z5 673 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 WDR72Q3MJ13 1102 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 SEZ6Q53EL9 994 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 SPOPLQ6IQ16 392 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 DNAJC24Q6P3W2 148 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 SYDE1Q6ZW31 735 aaPredicted RBP10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 ERICH1Q86X53 443 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 RHOT1Q8IXI2 618 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 FEZF2Q8TBJ5 459 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 FNIP1Q8TF40 1166 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 CD101Q93033 1021 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 CAVIN3Q969G5 261 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 CYFIP2Q96F07 1278 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 KIF12Q96FN5 646 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 TMEM176AQ96HP8 235 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 SNX27Q96L92 541 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 PSMB7Q99436 277 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 ARID3AQ99856 593 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 FUT8Q9BYC5 575 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 FAM49AQ9H0Q0 323 aaPredicted RBP10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 GDF3Q9NR23 364 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 SLC38A7Q9NVC3 462 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 FLRT1Q9NZU1 646 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 COG5Q9UP83 839 aa10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 UTP11Q9Y3A2 253 aaKnown RBP10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 GOLGB1Q14789 3259 aaKnown RBP10.28□□□□□ -0.76
NPIPA3-202ENST00000531598 CILPO75339 1184 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 HEXIM1O94992 359 aaKnown RBP10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 NPTXRO95502 500 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 TBC1D8O95759 1140 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 FGGP02679 453 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 NFICP08651 508 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 SKIP12755 728 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 KCNE1P15382 129 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 HOXA11P31270 313 aaPredicted RBP10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 FNTAP49354 379 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 PEX5P50542 639 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 DRG2P55039 364 aaKnown RBP10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 PRMT2P55345 433 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 COPS2P61201 443 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 OSTNP61366 133 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 ZNF268Q14587 947 aaPredicted RBP10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 SNX17Q15036 470 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 SGO2Q562F6 1265 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 XKR4Q5GH76 650 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 SPDYCQ5MJ68 293 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 PRAMEF19Q5SWL8 479 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 ALS2CLQ60I27 953 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 DPH6Q7L8W6 267 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 NIPA2Q8N8Q9 360 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 C3orf20Q8ND61 904 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 IPO4Q8TEX9 1081 aaKnown RBP10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 GRK7Q8WTQ7 553 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 LRRC45Q96CN5 670 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 CPB2Q96IY4 423 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 RBM41Q96IZ5 413 aaKnown RBP10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 MS4A14Q96JA4 679 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 KRT12Q99456 494 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 LRRC1Q9BTT6 524 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 NT5C1AQ9BXI3 368 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 FRMD8P1Q9BZ68 369 aaPredicted RBP10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 CELF4Q9BZC1 486 aaKnown RBP10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 TSPYL1Q9H0U9 437 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 CYLDQ9NQC7 956 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 ZNF446Q9NWS9 450 aa10.27□□□□□ -0.77
NPIPA3-202ENST00000531598 DDX56Q9NY93 547 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms