RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 CLCN5P51795 746 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 NLRP11P59045 1033 aaKnown RBP7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 PSMC5P62195 406 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 PLCB3Q01970 1234 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 GNL2Q13823 731 aaKnown RBP7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 IL17AQ16552 155 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 SPRED3Q2MJR0 410 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 XKR3Q5GH77 459 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 TTC38Q5R3I4 469 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 LARP1BQ659C4 914 aaKnown RBP7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 MCTP1Q6DN14 999 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 CES5AQ6NT32 575 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 KCNT2Q6UVM3 1135 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 SLC24A5Q71RS6 500 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 FAM228AQ86W67 206 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 TPH2Q8IWU9 490 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 CCDC105Q8IYK2 499 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 NME8Q8N427 588 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 DCLK2Q8N568 766 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 MRPL43Q8N983 215 aaKnown RBP7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 TDRD5Q8NAT2 981 aaKnown RBP7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 DTWD2Q8NBA8 298 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 RNF169Q8NCN4 708 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 RDM1Q8NG50 284 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 RIN2Q8WYP3 895 aaPredicted RBP7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 CASP10Q92851 521 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 CCDC74AQ96AQ1 378 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 CASD1Q96PB1 797 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 EIF2AK1Q9BQI3 630 aaKnown RBP7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 NGRNQ9NPE2 291 aaKnown RBP7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 RGS18Q9NS28 235 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 PUF60Q9UHX1 559 aaKnown RBP7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 SQORQ9Y6N5 450 aa7.78□□□□□ -1.16
TRIM53CP-201ENST00000531490 RALGAPA2Q2PPJ7 1873 aa7.77□□□□□ -1.16
TRIM53CP-201ENST00000531490 IGKV6-21A0A0C4DH24 114 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 MAGEB2O15479 319 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 NARSO43776 548 aaKnown RBP7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 MED24O75448 989 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 LAG3P18627 525 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 AOC1P19801 751 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 CDC25AP30304 524 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 FAM189BP81408 668 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 TMC5Q6UXY8 1006 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 PRR23CQ6ZRP0 262 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 TMEM173Q86WV6 379 aaPredicted RBP7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 CATSPER3Q86XQ3 398 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 KSR1Q8IVT5 923 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 C4orf19Q8IY42 314 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 ST13P5Q8NFI4 369 aaPredicted RBP7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 PIGOQ8TEQ8 1089 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 FAM167AQ96KS9 214 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 ZNF558Q96NG5 402 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 NECTIN4Q96NY8 510 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 LXNQ9BS40 222 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 ADAMTS10Q9H324 1103 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 SOX17Q9H6I2 414 aaPredicted RBP7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 DBR1Q9UK59 544 aaKnown RBP7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 AKT3Q9Y243 479 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 LZTS1Q9Y250 596 aa7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.77□□□□□ -1.17
TRIM53CP-201ENST00000531490 KDM3AQ9Y4C1 1321 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 H3BQV1 296 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 MAFO75444 373 aaPredicted RBP7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 CXCL14O95715 111 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 EOMESO95936 686 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 LMNAP02545 664 aaKnown RBP7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 MYBP10242 640 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 FGFR4P22455 802 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 MAPK1P28482 360 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 YWHABP31946 246 aaKnown RBP7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 ANP32AP39687 249 aaKnown RBP7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 ITIH3Q06033 890 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 DSC3Q14574 896 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 CLLU1OSQ5K130 101 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 ATAT1Q5SQI0 421 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 FAM173BQ6P4H8 233 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 FERMT3Q86UX7 667 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 ZDHHC14Q8IZN3 488 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 SLC39A11Q8N1S5 342 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 RSAD2Q8WXG1 361 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 TMEM143Q96AN5 459 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 CEP170P1Q96L14 293 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 TMEM117Q9H0C3 514 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 ZSWIM4Q9H7M6 989 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 POLD4Q9HCU8 107 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 CYP26B1Q9NR63 512 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 C1orf112Q9NSG2 853 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 TMEM161AQ9NX61 479 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 SPG21Q9NZD8 308 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 FBXL21Q9UKT6 434 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 CEP131Q9UPN4 1083 aa7.76□□□□□ -1.17
TRIM53CP-201ENST00000531490 ARID2Q68CP9 1835 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 A0A087WZ62 844 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 FSD2A1L4K1 749 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 PP2D1A8MPX8 630 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 OR52Z1P0C646 297 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 SYT1P21579 422 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 TMOD1P28289 359 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 MTHFRP42898 656 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms