RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 THEM5Q8N1Q8 247 aa11.87□□□□□ -0.51
CAPN1-221ENST00000531068 ELMOD1Q8N336 334 aa11.87□□□□□ -0.51
CAPN1-221ENST00000531068 SLC44A3Q8N4M1 653 aa11.87□□□□□ -0.51
CAPN1-221ENST00000531068 TRIM44Q96DX7 344 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-221ENST00000531068 ZNF512Q96ME7 567 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-221ENST00000531068 MYADMQ96S97 322 aa11.87□□□□□ -0.51
CAPN1-221ENST00000531068 RBSNQ9H1K0 784 aa11.87□□□□□ -0.51
CAPN1-221ENST00000531068 RBAKQ9NYW8 714 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-221ENST00000531068 USP25Q9UHP3 1055 aa11.87□□□□□ -0.51
CAPN1-221ENST00000531068 R3HCC1Q9Y3T6 440 aaKnown RBP11.87□□□□□ -0.51
CAPN1-221ENST00000531068 TIMM13Q9Y5L4 95 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-221ENST00000531068 ZNF233A6NK53 670 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 ANHXE9PGG2 379 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 KINO60870 393 aaKnown RBP11.86□□□□□ -0.51
CAPN1-221ENST00000531068 TAF6P49848 677 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 NUBP1P53384 320 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 NTHL1P78549 312 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 TFAMQ00059 246 aaKnown RBP11.86□□□□□ -0.51
CAPN1-221ENST00000531068 ADCY1Q08828 1119 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 SMARCB1Q12824 385 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 GPR17Q13304 367 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 CAMK4Q16566 473 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 SV2CQ496J9 727 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 FAM26FQ5R3K3 315 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 CYP4A22Q5TCH4 519 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 MTSS1LQ765P7 747 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 GPD1LQ8N335 351 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 ZNF507Q8TCN5 953 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 FGF13Q92913 245 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 SAAL1Q96ER3 474 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 CBWD1Q9BRT8 395 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 IKZF4Q9H2S9 585 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 MFSD1Q9H3U5 465 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 AVENQ9NQS1 362 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-221ENST00000531068 GDE1Q9NZC3 331 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 CGNQ9P2M7 1197 aaKnown RBP11.86□□□□□ -0.51
CAPN1-221ENST00000531068 DNMT3BQ9UBC3 853 aaKnown RBP11.86□□□□□ -0.51
CAPN1-221ENST00000531068 WNT16Q9UBV4 365 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 SERTAD1Q9UHV2 236 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 FBXL21Q9UKT6 434 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 DUSP12Q9UNI6 340 aa11.86□□□□□ -0.51
CAPN1-221ENST00000531068 MRPS23Q9Y3D9 190 aaKnown RBP11.86□□□□□ -0.51
CAPN1-221ENST00000531068 KPNA7A9QM74 516 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 CYB561D2O14569 222 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 PPEF2O14830 753 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 SPTLC1O15269 473 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 MICAL2O94851 1124 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 SEC24AO95486 1093 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 CAVIN2O95810 425 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 CYP11A1P05108 521 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 MYL1P05976 194 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 RHOP08100 348 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 AVPR2P30518 371 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 PLA2G5P39877 138 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 AFMP43652 599 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 RBP5P82980 135 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 PLD1Q13393 1074 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 RNF19BQ6ZMZ0 732 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 EPM2AIP1Q7L775 607 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-221ENST00000531068 HS2ST1Q7LGA3 356 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 LEMD2Q8NC56 503 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 NOC3LQ8WTT2 800 aaKnown RBP11.85□□□□□ -0.51
CAPN1-221ENST00000531068 RSAD2Q8WXG1 361 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 PAGE5Q96GU1 130 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 ZNF560Q96MR9 790 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 FGFBP2Q9BYJ0 223 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 PCIF1Q9H4Z3 704 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 KIAA1468Q9P260 1216 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 HSFX1Q9UBD0 423 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 INSL5Q9Y5Q6 135 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 UBE4BO95155 1302 aa11.85□□□□□ -0.51
CAPN1-221ENST00000531068 GOLGA8IPA6NC78 632 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 GOLGA8JA6NMD2 632 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 ESPNB1AK53 854 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 SRFP11831 508 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 ALDH1A3P47895 512 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 TUFMP49411 452 aaKnown RBP11.84□□□□□ -0.51
CAPN1-221ENST00000531068 CLCN5P51795 746 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 EPHB3P54753 998 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 PSMD2Q13200 908 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 HTR4Q13639 388 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 DUOXA2Q1HG44 320 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 PDZD4Q76G19 769 aaPredicted RBP11.84□□□□□ -0.51
CAPN1-221ENST00000531068 EFCAB13Q8IY85 973 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 CSGALNACT2Q8N6G5 542 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 LRRC52Q8N7C0 313 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 ITFG1Q8TB96 612 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 GOLGA5Q8TBA6 731 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 HPS3Q969F9 1004 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 ANKRD36BP1Q96IX9 119 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 CORO1BQ9BR76 489 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 IRF2BPLQ9H1B7 796 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 BLZF1Q9H2G9 400 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 HCFC1R1Q9NWW0 138 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 HSPBP1Q9NZL4 362 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 ITGA11Q9UKX5 1188 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 AGAP1Q9UPQ3 857 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 ASB3Q9Y575 518 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 NUMBLQ9Y6R0 609 aa11.84□□□□□ -0.51
CAPN1-221ENST00000531068 ATG2AQ2TAZ0 1938 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms