RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 APPL2Q8NEU8 664 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 CRACR2AQ9BSW2 395 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 TTPALQ9BTX7 342 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 ZBP1Q9H171 429 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 APOBEC3GQ9HC16 384 aaKnown RBP18.16■□□□□ 0.5
SF3B2-211ENST00000531041 TLR9Q9NR96 1032 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 NXF1Q9UBU9 619 aaKnown RBP18.16■□□□□ 0.5
SF3B2-211ENST00000531041 DSEQ9UL01 958 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 MYO7AQ13402 2215 aa18.16■□□□□ 0.5
SF3B2-211ENST00000531041 LPXNO60711 386 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 FAM163BP0C2L3 166 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 PON1P27169 355 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 GLUD2P49448 558 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 UBXN1Q04323 297 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 KCNMA1Q12791 1236 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 SOWAHAQ2M3V2 549 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 RTP2Q5QGT7 225 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 KIAA0319Q5VV43 1072 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 PDE12Q6L8Q7 609 aaKnown RBP18.15■□□□□ 0.5
SF3B2-211ENST00000531041 TRIM65Q6PJ69 517 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 CEP57Q86XR8 500 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 TMEM86AQ8N2M4 240 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 SPATA18Q8TC71 538 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 GDPD5Q8WTR4 605 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 ELMO3Q96BJ8 720 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 NAP1L5Q96NT1 182 aaPredicted RBP18.15■□□□□ 0.5
SF3B2-211ENST00000531041 NT5C1BQ96P26 610 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 BCO2Q9BYV7 579 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 INTS2Q9H0H0 1204 aaKnown RBP18.15■□□□□ 0.5
SF3B2-211ENST00000531041 CLSTN1O94985 981 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 URODP06132 367 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 SLC9A1P19634 815 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 UBASH3AP57075 661 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 ERVFC1P60507 584 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 MRPL58Q14197 206 aaKnown RBP18.15■□□□□ 0.5
SF3B2-211ENST00000531041 BMS1Q14692 1282 aaKnown RBP18.15■□□□□ 0.5
SF3B2-211ENST00000531041 NR1I3Q14994 352 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 KIAA1841Q6NSI8 718 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 PDXDC1Q6P996 788 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 TMC7Q7Z402 723 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 PDCL2Q8N4E4 241 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 PIK3R5Q8WYR1 880 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 TATDN2Q93075 761 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 B3GALT6Q96L58 329 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 ERGIC2Q96RQ1 377 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 MMS19Q96T76 1030 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 NIF3L1Q9GZT8 377 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 NGRNQ9NPE2 291 aaKnown RBP18.15■□□□□ 0.5
SF3B2-211ENST00000531041 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.15■□□□□ 0.51e-8■■■■■ 52.5
SF3B2-211ENST00000531041 L1RE1Q9UN81 338 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 POLIQ9UNA4 740 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 SSX2IPQ9Y2D8 614 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 IRAK3Q9Y616 596 aa18.15■□□□□ 0.5
SF3B2-211ENST00000531041 PLXNA3P51805 1871 aa18.14■□□□□ 0.49
SF3B2-211ENST00000531041 RFXAPO00287 272 aa18.14■□□□□ 0.49
SF3B2-211ENST00000531041 FSCN2O14926 492 aa18.14■□□□□ 0.49
SF3B2-211ENST00000531041 LILRB3O75022 631 aa18.14■□□□□ 0.49
SF3B2-211ENST00000531041 TACC1O75410 805 aa18.14■□□□□ 0.49
SF3B2-211ENST00000531041 OAZ2O95190 189 aa18.14■□□□□ 0.49
SF3B2-211ENST00000531041 ASPAP45381 313 aa18.14■□□□□ 0.49
SF3B2-211ENST00000531041 YWHAHQ04917 246 aaPredicted RBP18.14■□□□□ 0.49
SF3B2-211ENST00000531041 GRIN2CQ14957 1233 aa18.14■□□□□ 0.49
SF3B2-211ENST00000531041 VARS2Q5ST30 1063 aaKnown RBP18.14■□□□□ 0.49
SF3B2-211ENST00000531041 WSCD1Q658N2 575 aa18.14■□□□□ 0.49
SF3B2-211ENST00000531041 ANKS3Q6ZW76 656 aa18.14■□□□□ 0.49
SF3B2-211ENST00000531041 METTL23Q86XA0 190 aa18.14■□□□□ 0.49
SF3B2-211ENST00000531041 LNX1Q8TBB1 728 aaPredicted RBP18.14■□□□□ 0.49
SF3B2-211ENST00000531041 TCF25Q9BQ70 676 aa18.14■□□□□ 0.49
SF3B2-211ENST00000531041 FAM124BQ9H5Z6 455 aaPredicted RBP18.14■□□□□ 0.49
SF3B2-211ENST00000531041 CYP3A43Q9HB55 503 aa18.14■□□□□ 0.49
SF3B2-211ENST00000531041 ENTPD7Q9NQZ7 604 aa18.14■□□□□ 0.49
SF3B2-211ENST00000531041 MRPL17Q9NRX2 175 aaKnown RBP18.14■□□□□ 0.49
SF3B2-211ENST00000531041 TIMM13Q9Y5L4 95 aaPredicted RBP18.14■□□□□ 0.49
SF3B2-211ENST00000531041 GABRDO14764 452 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 TEX33O43247 280 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 CXCL14O95715 111 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 TBXAS1P24557 533 aaPredicted RBP18.13■□□□□ 0.49
SF3B2-211ENST00000531041 LRMPQ12912 555 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 SMC1AQ14683 1233 aaKnown RBP18.13■□□□□ 0.49
SF3B2-211ENST00000531041 PTPN14Q15678 1187 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 PTPROQ16827 1216 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 UVSSAQ2YD98 709 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 OVOS1Q6IE37 1185 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 PHLDB3Q6NSJ2 640 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 ADGRF2Q8IZF7 708 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 KBTBD7Q8WVZ9 684 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 RIN2Q8WYP3 895 aaPredicted RBP18.13■□□□□ 0.49
SF3B2-211ENST00000531041 MRPL38Q96DV4 380 aaKnown RBP18.13■□□□□ 0.49
SF3B2-211ENST00000531041 PRDM12Q9H4Q4 367 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 SIX2Q9NPC8 291 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.13■□□□□ 0.49
SF3B2-211ENST00000531041 LMCD1Q9NZU5 365 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 IFNKQ9P0W0 207 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 APEX2Q9UBZ4 518 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 SIK3Q9Y2K2 1263 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 MYH10P35580 1976 aa18.13■□□□□ 0.49
SF3B2-211ENST00000531041 PTPRDP23468 1912 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 H7C4K7 107 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 TBC1D4O60343 1298 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 WARSP23381 471 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms