RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 PIDD1Q9HB75 910 aa20.19■□□□□ 0.82
GMDS-208ENST00000530927 ZDHHC7Q9NXF8 308 aa20.19■□□□□ 0.82
GMDS-208ENST00000530927 CGNQ9P2M7 1197 aaKnown RBP20.19■□□□□ 0.82
GMDS-208ENST00000530927 ITGA11Q9UKX5 1188 aa20.19■□□□□ 0.82
GMDS-208ENST00000530927 POLIQ9UNA4 740 aa20.19■□□□□ 0.82
GMDS-208ENST00000530927 PDXKO00764 312 aa20.18■□□□□ 0.82
GMDS-208ENST00000530927 HCRTO43612 131 aa20.18■□□□□ 0.82
GMDS-208ENST00000530927 C1RP00736 705 aa20.18■□□□□ 0.82
GMDS-208ENST00000530927 TNNI1P19237 187 aa20.18■□□□□ 0.82
GMDS-208ENST00000530927 TYMPP19971 482 aa20.18■□□□□ 0.82
GMDS-208ENST00000530927 DLG4P78352 724 aa20.18■□□□□ 0.82
GMDS-208ENST00000530927 ADCY1Q08828 1119 aa20.18■□□□□ 0.82
GMDS-208ENST00000530927 SV2CQ496J9 727 aa20.18■□□□□ 0.82
GMDS-208ENST00000530927 CEP135Q66GS9 1140 aa20.18■□□□□ 0.82
GMDS-208ENST00000530927 GRASPQ7Z6J2 395 aaPredicted RBP20.18■□□□□ 0.82
GMDS-208ENST00000530927 WDR49Q8IV35 697 aa20.18■□□□□ 0.82
GMDS-208ENST00000530927 GOLGA5Q8TBA6 731 aa20.18■□□□□ 0.82
GMDS-208ENST00000530927 ZNF560Q96MR9 790 aa20.18■□□□□ 0.82
GMDS-208ENST00000530927 TIGD1Q96MW7 591 aa20.18■□□□□ 0.82
GMDS-208ENST00000530927 CGRRF1Q99675 332 aa20.18■□□□□ 0.82
GMDS-208ENST00000530927 CYP4F11Q9HBI6 524 aa20.18■□□□□ 0.82
GMDS-208ENST00000530927 DPP7Q9UHL4 492 aa20.18■□□□□ 0.82
GMDS-208ENST00000530927 LRRIQ3A6PVS8 624 aaPredicted RBP20.17■□□□□ 0.82
GMDS-208ENST00000530927 PRPF40AO75400 957 aaKnown RBP20.17■□□□□ 0.82
GMDS-208ENST00000530927 PAPLNO95428 1278 aa20.17■□□□□ 0.82
GMDS-208ENST00000530927 CST3P01034 146 aaPredicted RBP20.17■□□□□ 0.82
GMDS-208ENST00000530927 TNNC2P02585 160 aa20.17■□□□□ 0.82
GMDS-208ENST00000530927 CYP11A1P05108 521 aa20.17■□□□□ 0.82
GMDS-208ENST00000530927 PRCPP42785 496 aa20.17■□□□□ 0.82
GMDS-208ENST00000530927 DUOXA2Q1HG44 320 aa20.17■□□□□ 0.82
GMDS-208ENST00000530927 ELMSAN1Q6PJG2 1045 aa20.17■□□□□ 0.82
GMDS-208ENST00000530927 CCDC149Q6ZUS6 474 aa20.17■□□□□ 0.82
GMDS-208ENST00000530927 TRAPPC11Q7Z392 1133 aa20.17■□□□□ 0.82
GMDS-208ENST00000530927 GUF1Q8N442 669 aaKnown RBP20.17■□□□□ 0.82
GMDS-208ENST00000530927 TTC9BQ8N6N2 239 aa20.17■□□□□ 0.82
GMDS-208ENST00000530927 SPATA20Q8TB22 786 aa20.17■□□□□ 0.82
GMDS-208ENST00000530927 SMARCE1Q969G3 411 aa20.17■□□□□ 0.82
GMDS-208ENST00000530927 FNBP1Q96RU3 617 aa20.17■□□□□ 0.82
GMDS-208ENST00000530927 SMOC2Q9H3U7 446 aa20.17■□□□□ 0.82
GMDS-208ENST00000530927 WDR6Q9NNW5 1121 aaKnown RBP20.17■□□□□ 0.82
GMDS-208ENST00000530927 L1RE1Q9UN81 338 aa20.17■□□□□ 0.82
GMDS-208ENST00000530927 TRAF3IP3Q9Y228 551 aa20.17■□□□□ 0.82
GMDS-208ENST00000530927 CLUHO75153 1309 aa20.16■□□□□ 0.82
GMDS-208ENST00000530927 FAM86C2PA6NEL3 165 aa20.16■□□□□ 0.82
GMDS-208ENST00000530927 PRRG1O14668 218 aa20.16■□□□□ 0.82
GMDS-208ENST00000530927 KINO60870 393 aaKnown RBP20.16■□□□□ 0.82
GMDS-208ENST00000530927 ASGR2P07307 311 aa20.16■□□□□ 0.82
GMDS-208ENST00000530927 ATF2P15336 505 aa20.16■□□□□ 0.82
GMDS-208ENST00000530927 RBP5P82980 135 aa20.16■□□□□ 0.82
GMDS-208ENST00000530927 CCDC142Q17RM4 750 aa20.16■□□□□ 0.82
GMDS-208ENST00000530927 OSTM1Q86WC4 334 aa20.16■□□□□ 0.82
GMDS-208ENST00000530927 SLC9A9Q8IVB4 645 aa20.16■□□□□ 0.82
GMDS-208ENST00000530927 PDCL2Q8N4E4 241 aa20.16■□□□□ 0.82
GMDS-208ENST00000530927 ANP32EQ9BTT0 268 aa20.16■□□□□ 0.82
GMDS-208ENST00000530927 MAN1B1Q9UKM7 699 aa20.16■□□□□ 0.82
GMDS-208ENST00000530927 SNX9Q9Y5X1 595 aa20.16■□□□□ 0.82
GMDS-208ENST00000530927 NRG2O14511 850 aaPredicted RBP20.15■□□□□ 0.82
GMDS-208ENST00000530927 CALUO43852 315 aaPredicted RBP20.15■□□□□ 0.82
GMDS-208ENST00000530927 SOAT2O75908 522 aa20.15■□□□□ 0.82
GMDS-208ENST00000530927 PMS1P54277 932 aaKnown RBP20.15■□□□□ 0.82
GMDS-208ENST00000530927 SURF1Q15526 300 aa20.15■□□□□ 0.82
GMDS-208ENST00000530927 ZCWPW2Q504Y3 356 aa20.15■□□□□ 0.82
GMDS-208ENST00000530927 GET4Q7L5D6 327 aaPredicted RBP20.15■□□□□ 0.82
GMDS-208ENST00000530927 LRRTM3Q86VH5 581 aa20.15■□□□□ 0.82
GMDS-208ENST00000530927 LRRC52Q8N7C0 313 aa20.15■□□□□ 0.82
GMDS-208ENST00000530927 TDRD5Q8NAT2 981 aaKnown RBP20.15■□□□□ 0.82
GMDS-208ENST00000530927 PARD3BQ8TEW8 1205 aa20.15■□□□□ 0.82
GMDS-208ENST00000530927 CCDC34Q96HJ3 373 aa20.15■□□□□ 0.82
GMDS-208ENST00000530927 HPDLQ96IR7 371 aa20.15■□□□□ 0.82
GMDS-208ENST00000530927 MYADMQ96S97 322 aa20.15■□□□□ 0.82
GMDS-208ENST00000530927 DNMT3BQ9UBC3 853 aaKnown RBP20.15■□□□□ 0.82
GMDS-208ENST00000530927 AFF4Q9UHB7 1163 aaKnown RBP20.15■□□□□ 0.82
GMDS-208ENST00000530927 SLC27A5Q9Y2P5 690 aa20.15■□□□□ 0.82
GMDS-208ENST00000530927 NR2E1Q9Y466 385 aa20.15■□□□□ 0.82
GMDS-208ENST00000530927 INSL5Q9Y5Q6 135 aa20.15■□□□□ 0.82
GMDS-208ENST00000530927 NOTCH4Q99466 2003 aa20.15■□□□□ 0.82
GMDS-208ENST00000530927 PI4K2BG5E9Z4 385 aa20.14■□□□□ 0.81
GMDS-208ENST00000530927 AKAP3O75969 853 aa20.14■□□□□ 0.81
GMDS-208ENST00000530927 HNRNPA1P09651 372 aaKnown RBP eCLIP20.14■□□□□ 0.81
GMDS-208ENST00000530927 CD44P16070 742 aaKnown RBP20.14■□□□□ 0.81
GMDS-208ENST00000530927 NR2F2P24468 414 aa20.14■□□□□ 0.81
GMDS-208ENST00000530927 ACAT1P24752 427 aaKnown RBP20.14■□□□□ 0.81
GMDS-208ENST00000530927 ELF1P32519 619 aa20.14■□□□□ 0.81
GMDS-208ENST00000530927 PNPLA4P41247 253 aa20.14■□□□□ 0.81
GMDS-208ENST00000530927 C1orf220Q5T0J3 134 aa20.14■□□□□ 0.81
GMDS-208ENST00000530927 ZNF658Q5TYW1 1059 aaPredicted RBP20.14■□□□□ 0.81
GMDS-208ENST00000530927 TDRD10Q5VZ19 366 aaKnown RBP20.14■□□□□ 0.81
GMDS-208ENST00000530927 CLEC17AQ6ZS10 378 aa20.14■□□□□ 0.81
GMDS-208ENST00000530927 ATAD1Q8NBU5 361 aa20.14■□□□□ 0.81
GMDS-208ENST00000530927 ITFG1Q8TB96 612 aa20.14■□□□□ 0.81
GMDS-208ENST00000530927 GSDMAQ96QA5 445 aa20.14■□□□□ 0.81
GMDS-208ENST00000530927 RMND1Q9NWS8 449 aa20.14■□□□□ 0.81
GMDS-208ENST00000530927 LIMD1Q9UGP4 676 aa20.14■□□□□ 0.81
GMDS-208ENST00000530927 MTMR11A4FU01 709 aa20.13■□□□□ 0.81
GMDS-208ENST00000530927 TRIM49BA6NDI0 452 aa20.13■□□□□ 0.81
GMDS-208ENST00000530927 OR6C75A6NL08 312 aa20.13■□□□□ 0.81
GMDS-208ENST00000530927 BIN1O00499 593 aa20.13■□□□□ 0.81
GMDS-208ENST00000530927 SMC2O95347 1197 aa20.13■□□□□ 0.81
GMDS-208ENST00000530927 BMP6P22004 513 aa20.13■□□□□ 0.81
GMDS-208ENST00000530927 HOXA9P31269 272 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms