RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 EPS8L3Q8TE67 593 aaKnown RBP18.25■□□□□ 0.51
BRCA2-204ENST00000530893 P3H4Q92791 437 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 ANAPC5Q9UJX4 755 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 PCDHGC3Q9UN70 934 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 TNFSF9P41273 254 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 YWHAEP62258 255 aaKnown RBP18.25■□□□□ 0.51
BRCA2-204ENST00000530893 CPLX4Q7Z7G2 160 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 CCDC125Q86Z20 511 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 CACNA2D3Q8IZS8 1091 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 FAXDC2Q96IV6 333 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 GPR20Q99678 358 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 MTMR12Q9C0I1 747 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 CISHQ9NSE2 258 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 R3HDM2Q9Y2K5 976 aaKnown RBP18.25■□□□□ 0.51
BRCA2-204ENST00000530893 OTOFQ9HC10 1997 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 NOP56O00567 594 aaKnown RBP18.24■□□□□ 0.51
BRCA2-204ENST00000530893 ABLIM1O14639 778 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 PROZP22891 400 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 PTPN7P35236 360 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 LIG3P49916 1009 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 IFI35P80217 286 aaPredicted RBP18.24■□□□□ 0.51
BRCA2-204ENST00000530893 NFX1Q12986 1120 aaKnown RBP18.24■□□□□ 0.51
BRCA2-204ENST00000530893 TRPC3Q13507 836 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 TFDP1Q14186 410 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 LLGL1Q15334 1064 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 LY6KQ17RY6 165 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 SEZ6Q53EL9 994 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 CELF3Q5SZQ8 465 aaKnown RBP18.24■□□□□ 0.51
BRCA2-204ENST00000530893 TSHZ1Q6ZSZ6 1077 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 RNF149Q8NC42 400 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 MDM1Q8TC05 714 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 ATXN2LQ8WWM7 1075 aaKnown RBP18.24■□□□□ 0.51
BRCA2-204ENST00000530893 SEC16BQ96JE7 1060 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 CABS1Q96KC9 395 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 SELENOSQ9BQE4 189 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 HEMGNQ9BXL5 484 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 CEP83Q9Y592 693 aa18.24■□□□□ 0.51
BRCA2-204ENST00000530893 TCRBV5S1A1TA0A578 114 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 TTLL13PA6NNM8 815 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 TJP3O95049 919 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 MYL6P60660 151 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 PIGHQ14442 188 aaPredicted RBP18.23■□□□□ 0.51
BRCA2-204ENST00000530893 PLCB4Q15147 1175 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 MPZL3Q6UWV2 235 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 GADL1Q6ZQY3 521 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 ZBTB33Q86T24 672 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 NIPA2Q8N8Q9 360 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 ZNF317Q96PQ6 595 aaPredicted RBP18.23■□□□□ 0.51
BRCA2-204ENST00000530893 INTS9Q9NV88 658 aaKnown RBP18.23■□□□□ 0.51
BRCA2-204ENST00000530893 STRIP2Q9ULQ0 834 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 USTQ9Y2C2 406 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 LOC102724159A0A0B4J2E5 919 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 SMIM23A6NLE4 172 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 ZBTB42B2RXF5 422 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 ACKR2O00590 384 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 CXCL11O14625 94 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 NDC80O14777 642 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 B4GALT4O60513 344 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 SRGAP2CP0DJJ0 459 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 DRD4P21917 467 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 SSR1P43307 286 aaKnown RBP18.23■□□□□ 0.51
BRCA2-204ENST00000530893 IREB2P48200 963 aaKnown RBP18.23■□□□□ 0.51
BRCA2-204ENST00000530893 IFT88Q13099 833 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 MKRN4PQ13434 485 aaPredicted RBP18.23■□□□□ 0.51
BRCA2-204ENST00000530893 PWP2Q15269 919 aaKnown RBP18.23■□□□□ 0.51
BRCA2-204ENST00000530893 DNAJC24Q6P3W2 148 aa18.23■□□□□ 0.51
BRCA2-204ENST00000530893 DDX56Q9NY93 547 aaKnown RBP18.23■□□□□ 0.51
BRCA2-204ENST00000530893 O00370 1275 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 ASAP2O43150 1006 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 CD58P19256 250 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 CHKAP35790 457 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 RPL7AP62424 266 aaKnown RBP18.22■□□□□ 0.51
BRCA2-204ENST00000530893 QPCTQ16769 361 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 PPP1R15BQ5SWA1 713 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 UBAP2Q5T6F2 1119 aaKnown RBP18.22■□□□□ 0.51
BRCA2-204ENST00000530893 DAB2IPQ5VWQ8 1189 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 CCDC121Q6ZUS5 278 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 IPO4Q8TEX9 1081 aaKnown RBP18.22■□□□□ 0.51
BRCA2-204ENST00000530893 FZD8Q9H461 694 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 ACTR5Q9H9F9 607 aaPredicted RBP18.22■□□□□ 0.51
BRCA2-204ENST00000530893 PTPRHQ9HD43 1115 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 SOCS7O14512 581 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 ACSL3O95573 720 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 TNNC2P02585 160 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 HOXC6P09630 235 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 KLRC2P26717 231 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 ZNF699Q32M78 642 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 HSDL1Q3SXM5 330 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 DCUN1D2Q6PH85 259 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 UHMK1Q8TAS1 419 aaKnown RBP18.22■□□□□ 0.51
BRCA2-204ENST00000530893 UPF1Q92900 1129 aaKnown RBP eCLIP18.22■□□□□ 0.51
BRCA2-204ENST00000530893 DCPSQ96C86 337 aaKnown RBP18.22■□□□□ 0.51
BRCA2-204ENST00000530893 ANKRD36BP1Q96IX9 119 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 SLITRK1Q96PX8 696 aa18.22■□□□□ 0.51
BRCA2-204ENST00000530893 DDX23Q9BUQ8 820 aaKnown RBP18.22■□□□□ 0.51
BRCA2-204ENST00000530893 ASCC2Q9H1I8 757 aaPredicted RBP18.22■□□□□ 0.51
BRCA2-204ENST00000530893 PEX10O60683 326 aa18.21■□□□□ 0.51
BRCA2-204ENST00000530893 CNMDO75829 334 aa18.21■□□□□ 0.51
BRCA2-204ENST00000530893 IL18RAPO95256 599 aa18.21■□□□□ 0.51
BRCA2-204ENST00000530893 ARIH2O95376 493 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms