RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 TISP43B9A030 160 aa22.52■■□□□ 1.2
TSPAN4-219ENST00000530404 XPOTO43592 962 aaKnown RBP22.52■■□□□ 1.2
TSPAN4-219ENST00000530404 PIGRP01833 764 aa22.52■■□□□ 1.2
TSPAN4-219ENST00000530404 KRT18P05783 430 aaKnown RBP22.52■■□□□ 1.2
TSPAN4-219ENST00000530404 NFICP08651 508 aa22.52■■□□□ 1.2
TSPAN4-219ENST00000530404 RPS9P46781 194 aaKnown RBP22.52■■□□□ 1.2
TSPAN4-219ENST00000530404 OVOS1Q6IE37 1185 aa22.52■■□□□ 1.2
TSPAN4-219ENST00000530404 ZNF687Q8N1G0 1237 aa22.52■■□□□ 1.2
TSPAN4-219ENST00000530404 ATAD1Q8NBU5 361 aa22.52■■□□□ 1.2
TSPAN4-219ENST00000530404 RASSF8Q8NHQ8 419 aa22.52■■□□□ 1.2
TSPAN4-219ENST00000530404 ATRIPQ8WXE1 791 aa22.52■■□□□ 1.2
TSPAN4-219ENST00000530404 RAD54LQ92698 747 aa22.52■■□□□ 1.2
TSPAN4-219ENST00000530404 AK8Q96MA6 479 aa22.52■■□□□ 1.2
TSPAN4-219ENST00000530404 PARVGQ9HBI0 331 aa22.52■■□□□ 1.2
TSPAN4-219ENST00000530404 PRMT8Q9NR22 394 aaPredicted RBP22.52■■□□□ 1.2
TSPAN4-219ENST00000530404 PIAS3Q9Y6X2 628 aa22.52■■□□□ 1.2
TSPAN4-219ENST00000530404 A0A0B4J269 797 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 MTMR11A4FU01 709 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 OR6C75A6NL08 312 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 ANKRD63C9JTQ0 380 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 SPTLC1O15269 473 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 TRAK2O60296 914 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 ZNF131P52739 623 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 GPR17Q13304 367 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 SPATA1Q5VX52 437 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 LEMD2Q8NC56 503 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 DEPDC1BQ8WUY9 529 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 FAM3CQ92520 227 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 SENP8Q96LD8 212 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 FIZ1Q96SL8 496 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 IKZF4Q9H2S9 585 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 ZSCAN32Q9NX65 697 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 NCDNQ9UBB6 729 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 CPSF3Q9UKF6 684 aaKnown RBP22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 PCDHGA2Q9Y5H1 932 aa22.51■■□□□ 1.19
TSPAN4-219ENST00000530404 MAN2B1O00754 1011 aa22.5■■□□□ 1.19
TSPAN4-219ENST00000530404 ZNF263O14978 683 aa22.5■■□□□ 1.19
TSPAN4-219ENST00000530404 ACOT2P49753 483 aa22.5■■□□□ 1.19
TSPAN4-219ENST00000530404 EPHB3P54753 998 aa22.5■■□□□ 1.19
TSPAN4-219ENST00000530404 LILRA4P59901 499 aa22.5■■□□□ 1.19
TSPAN4-219ENST00000530404 KYAT1Q16773 422 aa22.5■■□□□ 1.19
TSPAN4-219ENST00000530404 ZC2HC1CQ53FD0 456 aaPredicted RBP22.5■■□□□ 1.19
TSPAN4-219ENST00000530404 LARP1BQ659C4 914 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-219ENST00000530404 CENPPQ6IPU0 288 aa22.5■■□□□ 1.19
TSPAN4-219ENST00000530404 MFSD6LQ8IWD5 586 aa22.5■■□□□ 1.19
TSPAN4-219ENST00000530404 ZBTB44Q8NCP5 570 aa22.5■■□□□ 1.19
TSPAN4-219ENST00000530404 KCNN1Q92952 543 aa22.5■■□□□ 1.19
TSPAN4-219ENST00000530404 LMAN1LQ9HAT1 526 aa22.5■■□□□ 1.19
TSPAN4-219ENST00000530404 TRPV4Q9HBA0 871 aa22.5■■□□□ 1.19
TSPAN4-219ENST00000530404 ADRB2P07550 413 aa22.49■■□□□ 1.19
TSPAN4-219ENST00000530404 ODC1P11926 461 aa22.49■■□□□ 1.19
TSPAN4-219ENST00000530404 TYMPP19971 482 aa22.49■■□□□ 1.19
TSPAN4-219ENST00000530404 CCNE1P24864 410 aa22.49■■□□□ 1.19
TSPAN4-219ENST00000530404 ALDH1A3P47895 512 aa22.49■■□□□ 1.19
TSPAN4-219ENST00000530404 PLD1Q13393 1074 aa22.49■■□□□ 1.19
TSPAN4-219ENST00000530404 SF3A1Q15459 793 aaKnown RBP22.49■■□□□ 1.19
TSPAN4-219ENST00000530404 C9orf57Q5W0N0 161 aa22.49■■□□□ 1.19
TSPAN4-219ENST00000530404 OR10T2Q8NGX3 314 aa22.49■■□□□ 1.19
TSPAN4-219ENST00000530404 NELL1Q92832 810 aa22.49■■□□□ 1.19
TSPAN4-219ENST00000530404 CHRDQ9H2X0 955 aa22.49■■□□□ 1.19
TSPAN4-219ENST00000530404 SMG5Q9UPR3 1016 aaKnown RBP22.49■■□□□ 1.19
TSPAN4-219ENST00000530404 ANAPC1Q9H1A4 1944 aa22.49■■□□□ 1.19
TSPAN4-219ENST00000530404 MED19A0JLT2 244 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-219ENST00000530404 ARNTLO00327 626 aa22.48■■□□□ 1.19
TSPAN4-219ENST00000530404 SLC26A4O43511 780 aa22.48■■□□□ 1.19
TSPAN4-219ENST00000530404 LILRB5O75023 590 aa22.48■■□□□ 1.19
TSPAN4-219ENST00000530404 TBCAO75347 108 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-219ENST00000530404 SOX9P48436 509 aa22.48■■□□□ 1.19
TSPAN4-219ENST00000530404 GTF2BQ00403 316 aa22.48■■□□□ 1.19
TSPAN4-219ENST00000530404 MYBPC2Q14324 1141 aa22.48■■□□□ 1.19
TSPAN4-219ENST00000530404 TMEM132DQ14C87 1099 aa22.48■■□□□ 1.19
TSPAN4-219ENST00000530404 DGLUCYQ7Z3D6 616 aa22.48■■□□□ 1.19
TSPAN4-219ENST00000530404 TTC8Q8TAM2 541 aa22.48■■□□□ 1.19
TSPAN4-219ENST00000530404 LPIN3Q9BQK8 851 aa22.48■■□□□ 1.19
TSPAN4-219ENST00000530404 OXCT2Q9BYC2 517 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-219ENST00000530404 SPAG17Q6Q759 2223 aa22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 EML5Q05BV3 1969 aa22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 SLC38A8A6NNN8 435 aa22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 PIRO00625 290 aa22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 LONP1P36776 959 aaKnown RBP22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 SLC39A12Q504Y0 691 aa22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 USP49Q70CQ1 688 aa22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 GAREM2Q75VX8 874 aa22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 DNAJB7Q7Z6W7 309 aaPredicted RBP22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 ARID3BQ8IVW6 561 aaPredicted RBP22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 YAF2Q8IY57 180 aa22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 CSGALNACT1Q8TDX6 532 aa22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 LARP4BQ92615 738 aaKnown RBP22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 ZFYVE19Q96K21 471 aa22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 MKNK1Q9BUB5 465 aa22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 GPR88Q9GZN0 384 aa22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 ATXN3LQ9H3M9 355 aa22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 TRPV5Q9NQA5 729 aa22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 MYO16Q9Y6X6 1858 aa22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 GREB1Q4ZG55 1949 aa22.47■■□□□ 1.19
TSPAN4-219ENST00000530404 TDGF1P13385 188 aa22.46■■□□□ 1.19
TSPAN4-219ENST00000530404 GABRR2P28476 465 aa22.46■■□□□ 1.19
TSPAN4-219ENST00000530404 CYP4F8P98187 520 aa22.46■■□□□ 1.19
TSPAN4-219ENST00000530404 RSPO4Q2I0M5 234 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms