RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 COL23A1Q86Y22 540 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 TMEM237Q96Q45 408 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 COPG1Q9Y678 874 aaKnown RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 NEURL4Q96JN8 1562 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 TRIM49D1C9J1S8 452 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 H0YC42 278 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 USP1O94782 785 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 SLC1A1P43005 524 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 MAPK10P53779 464 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 NLRP11P59045 1033 aaKnown RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 ANGPT1Q15389 498 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 EFHC2Q5JST6 749 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 ASZ1Q8WWH4 475 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 ATG4AQ8WYN0 398 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 CDHR1Q96JP9 859 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 C17orf80Q9BSJ5 609 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 MAGEB5Q9BZ81 275 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 KDM4CQ9H3R0 1056 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 DCLRE1BQ9H816 532 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 SCN3BQ9NY72 215 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 RBAKQ9NYW8 714 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 MOSPD1Q9UJG1 213 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 PXDNLA1KZ92 1463 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 MYMKA6NI61 221 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 GRAP2O75791 330 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 MYBP10242 640 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 HMOX2P30519 316 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 ABCD1P33897 745 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 RGS7P49802 495 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 SCARF1Q14162 830 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 MAPK11Q15759 364 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 MAPK6Q16659 721 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 DCAF4L1Q3SXM0 396 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 TTC39BQ5VTQ0 682 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 MTHFD1LQ6UB35 978 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 BTN2A2Q8WVV5 523 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 ARHGEF1Q92888 912 aaKnown RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 CNKSR1Q969H4 720 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 ZBED2Q9BTP6 218 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 PABPC3Q9H361 631 aaKnown RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 PI4KBQ9UBF8 816 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 GSG1L2A8MUP6 293 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 PPEF1O14829 653 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 TFRCP02786 760 aaKnown RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 USP11P51784 963 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 ABCE1P61221 599 aaKnown RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 CACNB2Q08289 660 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 NFX1Q12986 1120 aaKnown RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 GRM4Q14833 912 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 ITPRIPL1Q6GPH6 555 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 CLEC4GQ6UXB4 293 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 CATSPER4Q7RTX7 472 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 TLK2Q86UE8 772 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 P3H2Q8IVL5 708 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 PCYOX1LQ8NBM8 494 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 TUBGCP3Q96CW5 907 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 MMTAG2Q9BU76 263 aaKnown RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 PAIP1Q9H074 479 aaKnown RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 ALDH8A1Q9H2A2 487 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 UTP6Q9NYH9 597 aaKnown RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 TMCC1O94876 653 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 PARNO95453 639 aaKnown RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 FMO5P49326 533 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 NME5P56597 212 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 MAPRE1Q15691 268 aaKnown RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 FAXCQ5TGI0 409 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 SWSAP1Q6NVH7 229 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 HAUS6Q7Z4H7 955 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 HORMAD1Q86X24 394 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 DNAAF5Q86Y56 855 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 NLGN1Q8N2Q7 840 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 DDI1Q8WTU0 396 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 ARHGEF26Q96DR7 871 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 SERPINB12Q96P63 405 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 FAM129AQ9BZQ8 928 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 IL25Q9H293 177 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 KIAA1586Q9HCI6 787 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 PCDHGB4Q9UN71 923 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 PREX1Q8TCU6 1659 aa7.97□□□□□ -1.13
CTNND1-223ENST00000529986 PPP1R3GB7ZBB8 358 aa7.97□□□□□ -1.13
CTNND1-223ENST00000529986 ZNF189O75820 626 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-223ENST00000529986 RHOBTB3O94955 611 aa7.97□□□□□ -1.13
CTNND1-223ENST00000529986 OCM2P0CE71 109 aa7.97□□□□□ -1.13
CTNND1-223ENST00000529986 OCMP0CE72 109 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-223ENST00000529986 PYGMP11217 842 aa7.97□□□□□ -1.13
CTNND1-223ENST00000529986 RALAP11233 206 aa7.97□□□□□ -1.13
CTNND1-223ENST00000529986 GEMIN4P57678 1058 aaKnown RBP7.97□□□□□ -1.13
CTNND1-223ENST00000529986 WASHC5Q12768 1159 aa7.97□□□□□ -1.13
CTNND1-223ENST00000529986 SUSD4Q5VX71 490 aa7.97□□□□□ -1.13
CTNND1-223ENST00000529986 UTS2BQ765I0 119 aa7.97□□□□□ -1.13
CTNND1-223ENST00000529986 ADGRF4Q8IZF3 695 aa7.97□□□□□ -1.13
CTNND1-223ENST00000529986 GPD1LQ8N335 351 aa7.97□□□□□ -1.13
CTNND1-223ENST00000529986 ZNF513Q8N8E2 541 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-223ENST00000529986 FAM71DQ8N9W8 422 aa7.97□□□□□ -1.13
CTNND1-223ENST00000529986 RMDN3Q96TC7 470 aa7.97□□□□□ -1.13
CTNND1-223ENST00000529986 SPON2Q9BUD6 331 aa7.97□□□□□ -1.13
CTNND1-223ENST00000529986 POLR3FQ9H1D9 316 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-223ENST00000529986 SP110Q9HB58 689 aa7.97□□□□□ -1.13
CTNND1-223ENST00000529986 GABBR1Q9UBS5 961 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms