RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 ZNF233A6NK53 670 aa16.7■□□□□ 0.26
CCDC90B-215ENST00000529745 SP100P23497 879 aaPredicted RBP16.7■□□□□ 0.26
CCDC90B-215ENST00000529745 PNPLA4P41247 253 aa16.7■□□□□ 0.26
CCDC90B-215ENST00000529745 NDUFA8P51970 172 aa16.7■□□□□ 0.26
CCDC90B-215ENST00000529745 GRAMD1CQ8IYS0 662 aa16.7■□□□□ 0.26
CCDC90B-215ENST00000529745 LRRC52Q8N7C0 313 aa16.7■□□□□ 0.26
CCDC90B-215ENST00000529745 NXPE3Q969Y0 559 aa16.7■□□□□ 0.26
CCDC90B-215ENST00000529745 ZNF560Q96MR9 790 aa16.7■□□□□ 0.26
CCDC90B-215ENST00000529745 PCIF1Q9H4Z3 704 aa16.7■□□□□ 0.26
CCDC90B-215ENST00000529745 IGSF9Q9P2J2 1179 aa16.7■□□□□ 0.26
CCDC90B-215ENST00000529745 ITGA11Q9UKX5 1188 aa16.7■□□□□ 0.26
CCDC90B-215ENST00000529745 DSEQ9UL01 958 aa16.7■□□□□ 0.26
CCDC90B-215ENST00000529745 CACNA1BQ00975 2339 aa16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 RIF1Q5UIP0 2472 aaKnown RBP16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 GOLGA8IPA6NC78 632 aa16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 GOLGA8JA6NMD2 632 aa16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 ELF1P32519 619 aa16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 GPR17Q13304 367 aa16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 MTMR3Q13615 1198 aa16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 KNOP1Q1ED39 458 aaKnown RBP16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 SV2CQ496J9 727 aa16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 OVOS1Q6IE37 1185 aa16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 HS2ST1Q7LGA3 356 aa16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 USP37Q86T82 979 aa16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 C1orf127Q8N9H9 656 aa16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 ASIC4Q96FT7 647 aa16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 MYADMQ96S97 322 aa16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 SLC39A2Q9NP94 309 aa16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 HSFX1Q9UBD0 423 aa16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 VPS13AQ96RL7 3174 aa16.69■□□□□ 0.26
CCDC90B-215ENST00000529745 CCL16O15467 120 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 SEC24AO95486 1093 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 STK4Q13043 487 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 KMT5BQ4FZB7 885 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 KRBA2Q6ZNG9 492 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 ERMP1Q7Z2K6 904 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 GRASPQ7Z6J2 395 aaPredicted RBP16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 CBWD2Q8IUF1 395 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 FSIP1Q8NA03 581 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 XXYLT1Q8NBI6 393 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 KIAA0895Q8NCT3 520 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 GOLGA5Q8TBA6 731 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 SPATA18Q8TC71 538 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 GOLPH3LQ9H4A5 285 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 PDE11AQ9HCR9 933 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 EXOC1Q9NV70 894 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 INTS13Q9NVM9 706 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 DNMT3BQ9UBC3 853 aaKnown RBP16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 LIMD1Q9UGP4 676 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 TIMM13Q9Y5L4 95 aaPredicted RBP16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 INSL5Q9Y5Q6 135 aa16.68■□□□□ 0.26
CCDC90B-215ENST00000529745 FAM186AA6NE01 2351 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 DENND4CQ5VZ89 1909 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 TMEM221A6NGB7 291 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 KPNA7A9QM74 516 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 M0R296 226 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 RHOBTB3O94955 611 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 VNN2O95498 520 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 LRG1P02750 347 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 ITGB3P05106 788 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 LAMP2P13473 410 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 CPB1P15086 417 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 FSHRP23945 695 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 GBP2P32456 591 aaPredicted RBP16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 TFAMQ00059 246 aaKnown RBP16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 DPYDQ12882 1025 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 RNF19BQ6ZMZ0 732 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 WDR49Q8IV35 697 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 SLC9A9Q8IVB4 645 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 ANKRD36BP1Q96IX9 119 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 KCNK12Q9HB15 430 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 CYP4F11Q9HBI6 524 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 FAM86C1Q9NVL1 165 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 GDAP2Q9NXN4 497 aa16.67■□□□□ 0.26
CCDC90B-215ENST00000529745 ANHXE9PGG2 379 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 CYB561D2O14569 222 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 PRRG1O14668 218 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 MICAL2O94851 1124 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 ZNF202O95125 648 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 RPN1P04843 607 aaKnown RBP16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 ASGR2P07307 311 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 TMEM191BP0C7N4 346 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 PTPN2P17706 415 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 POLR2BP30876 1174 aaKnown RBP16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 ADCY1Q08828 1119 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 SMARCB1Q12824 385 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 TDGQ13569 410 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 KCNB1Q14721 858 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 PSMD6Q15008 389 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 SNRNP35Q16560 246 aaKnown RBP16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 NELFCDQ8IXH7 590 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 RTP3Q9BQQ7 232 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 KCTD10Q9H3F6 313 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 GDPD2Q9HCC8 539 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 DMAC2Q9NW81 257 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 SIX4Q9UIU6 781 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 CDH7Q9ULB5 785 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 DUSP12Q9UNI6 340 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 AGAP1Q9UPQ3 857 aa16.66■□□□□ 0.26
CCDC90B-215ENST00000529745 PTPRJQ12913 1337 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms