RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 CXADRP78310 365 aa5.87□□□□□ -1.47
CTR9-204ENST00000529355 SCAPQ12770 1279 aa5.87□□□□□ -1.47
CTR9-204ENST00000529355 HABP2Q14520 560 aaPredicted RBP5.87□□□□□ -1.47
CTR9-204ENST00000529355 CYP2A13Q16696 494 aa5.87□□□□□ -1.47
CTR9-204ENST00000529355 CD300EQ496F6 205 aaPredicted RBP5.87□□□□□ -1.47
CTR9-204ENST00000529355 CRIP3Q6Q6R5 217 aa5.87□□□□□ -1.47
CTR9-204ENST00000529355 USP37Q86T82 979 aa5.87□□□□□ -1.47
CTR9-204ENST00000529355 BRIX1Q8TDN6 353 aaKnown RBP5.87□□□□□ -1.47
CTR9-204ENST00000529355 RNF31Q96EP0 1072 aa5.87□□□□□ -1.47
CTR9-204ENST00000529355 PNKPQ96T60 521 aa5.87□□□□□ -1.47
CTR9-204ENST00000529355 ALOXE3Q9BYJ1 711 aa5.87□□□□□ -1.47
CTR9-204ENST00000529355 TINAGL1Q9GZM7 467 aaPredicted RBP5.87□□□□□ -1.47
CTR9-204ENST00000529355 GPR35Q9HC97 309 aa5.87□□□□□ -1.47
CTR9-204ENST00000529355 FAM50BQ9Y247 325 aa5.87□□□□□ -1.47
CTR9-204ENST00000529355 CFAP69A5D8W1 941 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 CAPN8A6NHC0 703 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 M0QYG6 137 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 LAG3P18627 525 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 KIAA0753Q2KHM9 967 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 RNF220Q5VTB9 566 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 ZNF627Q7L945 461 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 PDSS2Q86YH6 399 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 VRK3Q8IV63 474 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 FAM46DQ8NEK8 389 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 ASB10Q8WXI3 467 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 SCAMP4Q969E2 229 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 MYEOVQ96EZ4 313 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 REXO4Q9GZR2 422 aaKnown RBP5.86□□□□□ -1.47
CTR9-204ENST00000529355 SARS2Q9NP81 518 aaKnown RBP5.86□□□□□ -1.47
CTR9-204ENST00000529355 STK32BQ9NY57 414 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 ETAA1Q9NY74 926 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 CFAP97Q9P2B7 532 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 CPNE7Q9UBL6 633 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 ZDHHC8Q9ULC8 765 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 FZD1Q9UP38 647 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 MTO1Q9Y2Z2 717 aaKnown RBP5.86□□□□□ -1.47
CTR9-204ENST00000529355 HS3ST4Q9Y661 456 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 HS3ST3A1Q9Y663 406 aa5.86□□□□□ -1.47
CTR9-204ENST00000529355 TMEM233B4DJY2 109 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 FAM227AF5H4B4 570 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 TBX3O15119 743 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 ERN1O75460 977 aaKnown RBP5.85□□□□□ -1.47
CTR9-204ENST00000529355 UNC5CO95185 931 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 ZBED1O96006 694 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 RHCEP18577 417 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 FDXRP22570 491 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 GATA3P23771 443 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 DDX6P26196 483 aaKnown RBP eCLIP5.85□□□□□ -1.47
CTR9-204ENST00000529355 GNALP38405 381 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 IL12RB1P42701 662 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 RHDQ02161 417 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 TIGD2Q4W5G0 525 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 TAPT1Q6NXT6 567 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 TAF2Q6P1X5 1199 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 Q6ZPA2 131 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 GPR149Q86SP6 731 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 MAML1Q92585 1016 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 HAS1Q92839 578 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 TRIB1Q96RU8 372 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 SCAND2PQ9GZW5 306 aaPredicted RBP5.85□□□□□ -1.47
CTR9-204ENST00000529355 PRDM11Q9NQV5 511 aa5.85□□□□□ -1.47
CTR9-204ENST00000529355 GNL3LQ9NVN8 582 aaKnown RBP5.85□□□□□ -1.47
CTR9-204ENST00000529355 A0A1W2PPL8 197 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 OVOL3O00110 214 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 POLRMTO00411 1230 aaKnown RBP5.84□□□□□ -1.47
CTR9-204ENST00000529355 APAF1O14727 1248 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 ZNF202O95125 648 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 SPATA31D3P0C874 917 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 C6P13671 934 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 KCNJ5P48544 419 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 ARFIP2P53365 341 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 EMC10Q5UCC4 262 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 SPATA31D4Q6ZUB0 917 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 PPP1R32Q7Z5V6 425 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 PROKR1Q8TCW9 393 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 LARP4BQ92615 738 aaKnown RBP5.84□□□□□ -1.47
CTR9-204ENST00000529355 ANKS1AQ92625 1134 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 TMEM125Q96AQ2 219 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 LENG9Q96B70 501 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 MTFMTQ96DP5 389 aaKnown RBP5.84□□□□□ -1.47
CTR9-204ENST00000529355 WDR11Q9BZH6 1224 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 FAM204AQ9H8W3 233 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 UNKLQ9H9P5 680 aaKnown RBP5.84□□□□□ -1.47
CTR9-204ENST00000529355 RLIMQ9NVW2 624 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 TBC1D30Q9Y2I9 924 aa5.84□□□□□ -1.47
CTR9-204ENST00000529355 GAGE12BA1L429 117 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 GAGE12HA6NDE8 117 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 MYO1FO00160 1098 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 DCLK1O15075 740 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 CDKL5O76039 1030 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 ABHD16AO95870 558 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 ANXA1P04083 346 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 KCNA2P16389 499 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 SLC7A1P30825 629 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 BMPR1AP36894 532 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 SUMO3P55854 103 aaPredicted RBP5.83□□□□□ -1.48
CTR9-204ENST00000529355 GPSM2P81274 684 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 CTBP1Q13363 440 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 SEMA5AQ13591 1074 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 FOXR2Q6PJQ5 311 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms