RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 LONRF1Q17RB8 773 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 DAB2IPQ5VWQ8 1189 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 LMBRD2Q68DH5 695 aaPredicted RBP16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 TAPT1Q6NXT6 567 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 C15orf39Q6ZRI6 1047 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 EXOC3L1Q86VI1 746 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 CCDC197Q8NCU1 140 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 MCPH1Q8NEM0 835 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 GPR20Q99678 358 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 AVENQ9NQS1 362 aaPredicted RBP16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 XPNPEP1Q9NQW7 623 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 PDLIM7Q9NR12 457 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 CYP26B1Q9NR63 512 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 PDGFCQ9NRA1 345 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 ASIC3Q9UHC3 531 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 ASAP2O43150 1006 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 ACSL3O95573 720 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 GH1P01241 217 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 HOXC6P09630 235 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 STAT5BP51692 787 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 WNT7BP56706 349 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 LAMC2Q13753 1193 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 TRIP13Q15645 432 aaPredicted RBP16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 CNGA2Q16280 664 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 SWT1Q5T5J6 900 aaKnown RBP16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 ENOSF1Q7L5Y1 443 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 USP37Q86T82 979 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 DDX27Q96GQ7 796 aaKnown RBP16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 PLVAPQ9BX97 442 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 ROPN1BQ9BZX4 212 aaPredicted RBP16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 CCDC113Q9H0I3 377 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 KDM4CQ9H3R0 1056 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 C17orf75Q9HAS0 396 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 ROPN1Q9HAT0 212 aaPredicted RBP16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 CREBZFQ9NS37 354 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 NRBP2Q9NSY0 501 aa16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 R3HDM2Q9Y2K5 976 aaKnown RBP16.76■□□□□ 0.27
TM9SF1-208ENST00000529332 O00370 1275 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 TNPO2O14787 897 aaKnown RBP16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 SNAI1O95863 264 aaPredicted RBP16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 GARTP22102 1010 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 RGS2P41220 211 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 IFNAR2P48551 515 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 IRF5Q13568 498 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 DEFB115Q30KQ5 88 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 BRDTQ58F21 947 aaPredicted RBP16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 NPLOC4Q8TAT6 608 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 DCLK3Q9C098 648 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 STMN4Q9H169 189 aaPredicted RBP16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 ATP6V0A4Q9HBG4 840 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 HAUS2Q9NVX0 235 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 PPME1Q9Y570 386 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 CCT8L1PA6NM43 557 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 ZC3H11AO75152 810 aaKnown RBP eCLIP16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 LGR5O75473 907 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 CREB1P16220 341 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 ITIH2P19823 946 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 PTK6Q13882 451 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 HSDL1Q3SXM5 330 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 P3H4Q92791 437 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 BICD1Q96G01 975 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 SNF8Q96H20 258 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 KATNBL1Q9H079 304 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 C1orf112Q9NSG2 853 aa16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 DNAJC17Q9NVM6 304 aaKnown RBP16.75■□□□□ 0.27
TM9SF1-208ENST00000529332 CFHP08603 1231 aa16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 GHRP10912 638 aa16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 SLC26A2P50443 739 aa16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 ITGA8P53708 1063 aa16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 ACVR2BQ13705 512 aa16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 MTERF2Q49AM1 385 aa16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 SPOPLQ6IQ16 392 aa16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 PLPPR4Q7Z2D5 763 aa16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 EMID1Q96A84 441 aaPredicted RBP16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 CAPNS2Q96L46 248 aa16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 ZIC5Q96T25 663 aa16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 PCYT2Q99447 389 aa16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 APBA2Q99767 749 aa16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 NIFKQ9BYG3 293 aaKnown RBP16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 ARHGAP28Q9P2N2 729 aa16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 PCDHB2Q9Y5E7 798 aa16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 DOCK3Q8IZD9 2030 aa16.74■□□□□ 0.27
TM9SF1-208ENST00000529332 FOXO6A8MYZ6 492 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 CYP1A1P04798 512 aaPredicted RBP16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 SLC1A1P43005 524 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 POLGP54098 1239 aaPredicted RBP16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 ENPEPQ07075 957 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 ARHGAP1Q07960 439 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 MON1BQ7L1V2 547 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 TAOK1Q7L7X3 1001 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 FUKQ8N0W3 1084 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 IPO4Q8TEX9 1081 aaKnown RBP16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 COPS5Q92905 334 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 PWWP2AQ96N64 755 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 ELAC2Q9BQ52 826 aaKnown RBP16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 HEMGNQ9BXL5 484 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 SMARCAD1Q9H4L7 1026 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 CTNNAL1Q9UBT7 734 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 PTPRJQ12913 1337 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 UMODL1Q5DID0 1318 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms