RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 PAPSS2O95340 614 aaPredicted RBP9.32□□□□□ -0.92
SSBP3-212ENST00000528930 VSIG8P0DPA2 414 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 CTSAP10619 480 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 PDCP20941 246 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 PFKPQ01813 784 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 TFDP1Q14186 410 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 BMS1Q14692 1282 aaKnown RBP9.32□□□□□ -0.92
SSBP3-212ENST00000528930 PCBP1Q15365 356 aaKnown RBP eCLIP9.32□□□□□ -0.921e-6■■■■□ 22.1
SSBP3-212ENST00000528930 KRT79Q5XKE5 535 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 CDCA2Q69YH5 1023 aaPredicted RBP9.32□□□□□ -0.92
SSBP3-212ENST00000528930 TPRG1Q6ZUI0 275 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 KCNK18Q7Z418 384 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 LONP2Q86WA8 852 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 LRRC43Q8N309 656 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 RNF169Q8NCN4 708 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 SMG8Q8ND04 991 aaKnown RBP9.32□□□□□ -0.92
SSBP3-212ENST00000528930 HELQQ8TDG4 1101 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 UBE2Q2Q8WVN8 375 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 FGF14Q92915 247 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 PNMA5Q96PV4 448 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 SMOC1Q9H4F8 434 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 MTMR6Q9Y217 621 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 PCDHB2Q9Y5E7 798 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 PTPRQQ9UMZ3 2332 aa9.32□□□□□ -0.92
SSBP3-212ENST00000528930 MUC22E2RYF6 1773 aaPredicted RBP9.32□□□□□ -0.92
SSBP3-212ENST00000528930 INO80B-WBP1J3KQ70 363 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 OFD1O75665 1012 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 SKIP12755 728 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 ARF4P18085 180 aaPredicted RBP9.31□□□□□ -0.92
SSBP3-212ENST00000528930 AXLP30530 894 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 RAB27AP51159 221 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 SATB1Q01826 763 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 GRIN1Q05586 938 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 RESTQ13127 1097 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 PTPAQ15257 358 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 SF3A1Q15459 793 aaKnown RBP9.31□□□□□ -0.92
SSBP3-212ENST00000528930 LONRF3Q496Y0 759 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 TCEAL6Q6IPX3 200 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 FAM173BQ6P4H8 233 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 AGMOQ6ZNB7 445 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 FAM174AQ8TBP5 190 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 LRRC15Q8TF66 581 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 TCEAL3Q969E4 200 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 CRELD1Q96HD1 420 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 CPB2Q96IY4 423 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 EIF2AQ9BY44 585 aaKnown RBP9.31□□□□□ -0.92
SSBP3-212ENST00000528930 FZD8Q9H461 694 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 VPS45Q9NRW7 570 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 DNM3Q9UQ16 869 aa9.31□□□□□ -0.92
SSBP3-212ENST00000528930 MRPS17Q9Y2R5 130 aaKnown RBP9.31□□□□□ -0.92
SSBP3-212ENST00000528930 ZFP37Q9Y6Q3 630 aaPredicted RBP9.31□□□□□ -0.92
SSBP3-212ENST00000528930 A0A1B0GUA9 196 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 LRRIQ4A6NIV6 560 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 K7ESF4 209 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 TULP1O00294 542 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-212ENST00000528930 B4GALT5O43286 388 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 ERLIN2O94905 339 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 EDN1P05305 212 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 CA8P35219 290 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 MPLP40238 635 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 AFF1P51825 1210 aaKnown RBP9.3□□□□□ -0.92
SSBP3-212ENST00000528930 FAM187BQ17R55 369 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 TMEM119Q4V9L6 283 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 RINT1Q6NUQ1 792 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 NOTUMQ6P988 496 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 PARM1Q6UWI2 310 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 ZNF852Q6ZMS4 543 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 C1orf186Q6ZWK4 172 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 CEP68Q76N32 757 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 CDR2LQ86X02 465 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-212ENST00000528930 ABI1Q8IZP0 508 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 DAW1Q8N136 415 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 VPS52Q8N1B4 723 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 ST13P5Q8NFI4 369 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-212ENST00000528930 PGBD4Q96DM1 585 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 AK8Q96MA6 479 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 RUSC1Q9BVN2 902 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 CCDC113Q9H0I3 377 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 CSRNP2Q9H175 543 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 CCDC86Q9H6F5 360 aaKnown RBP9.3□□□□□ -0.92
SSBP3-212ENST00000528930 TBC1D13Q9NVG8 400 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 RAXQ9Y2V3 346 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 IPPQ9Y573 584 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 CLIC4Q9Y696 253 aa9.3□□□□□ -0.92
SSBP3-212ENST00000528930 TNRC6BQ9UPQ9 1833 aaKnown RBP9.29□□□□□ -0.92
SSBP3-212ENST00000528930 LNP1A1A4G5 178 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 STX6O43752 255 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 B4GALT3O60512 393 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 BMP15O95972 392 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 NAMPTP43490 491 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 CXCL12P48061 93 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 GSK3AP49840 483 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 SLC12A3P55017 1021 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 MAPK7Q13164 816 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 NOMO2Q5JPE7 1267 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 GET4Q7L5D6 327 aaPredicted RBP9.29□□□□□ -0.92
SSBP3-212ENST00000528930 ZNF280BQ86YH2 543 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 ZBTB8OSQ8IWT0 167 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 SYT2Q8N9I0 419 aaPredicted RBP9.29□□□□□ -0.92
SSBP3-212ENST00000528930 CNNM3Q8NE01 707 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms