RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	YIPF1	Q9Y548	306 aa		12.37	□□□□□ -0.43
PTP4A2-211	ENST00000528840	PATJ	Q8NI35	1801 aa		12.37	□□□□□ -0.43
PTP4A2-211	ENST00000528840	NCAN	O14594	1321 aa		12.37	□□□□□ -0.43
PTP4A2-211	ENST00000528840	OR6C75	A6NL08	312 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	SLC38A8	A6NNN8	435 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	CHURC1-FNTB	B4DL54	471 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	CHAD	O15335	359 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	HR	O43593	1189 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	SOAT2	O75908	522 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	CYP3A5	P20815	502 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	FNTB	P49356	437 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	LIG4	P49917	911 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	PPP2R3A	Q06190	1150 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	DMWD	Q09019	674 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	SIM2	Q14190	667 aa	Predicted RBP	12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	GAS6	Q14393	721 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	DHX8	Q14562	1220 aa	Known RBP	12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	ARSH	Q5FYA8	562 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	STXBP5	Q5T5C0	1151 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	HEATR6	Q6AI08	1181 aa	Known RBP	12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	OVOS1	Q6IE37	1185 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	ARMCX5	Q6P1M9	558 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	HAUS6	Q7Z4H7	955 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	FAM200A	Q8TCP9	573 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	CNTNAP3B	Q96NU0	1288 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	LRRC3B	Q96PB8	259 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	IER2	Q9BTL4	223 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	CNTNAP3	Q9BZ76	1288 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	DNAJC25	Q9H1X3	360 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	ATXN3L	Q9H3M9	355 aa		12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	RPF1	Q9H9Y2	349 aa	Known RBP	12.36	□□□□□ -0.43
PTP4A2-211	ENST00000528840	VWA3A	A6NCI4	1184 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	ARNTL	O00327	626 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	DPYSL4	O14531	572 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	PPEF2	O14830	753 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	XPOT	O43592	962 aa	Known RBP	12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	MLLT6	P55198	1093 aa	Predicted RBP	12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	LILRA4	P59901	499 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	SRSF5	Q13243	272 aa	Known RBP	12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	LRRC32	Q14392	662 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	ENOX2	Q16206	610 aa	Known RBP	12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	HYI	Q5T013	277 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	GPR158	Q5T848	1215 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	LAIR1	Q6GTX8	287 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	TMC8	Q8IU68	726 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	SPEM1	Q8N4L4	309 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	MYCT1	Q8N699	235 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	ZFYVE19	Q96K21	471 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	SENP8	Q96LD8	212 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	TMEM209	Q96SK2	561 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	RTKN	Q9BST9	563 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	C8orf33	Q9H7E9	229 aa	Predicted RBP	12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	GTSE1	Q9NYZ3	720 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	LARS	Q9P2J5	1176 aa	Known RBP	12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	TBX20	Q9UMR3	447 aa		12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	12.35	□□□□□ -0.43
PTP4A2-211	ENST00000528840	OTOGL	Q3ZCN5	2332 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	CIT	O14578	2027 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	SPECC1L-ADORA2A	F8WAN1	911 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840		H0YCG3	227 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	RET	P07949	1114 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	TYMP	P19971	482 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	GABRR2	P28476	465 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	AARS	P49588	968 aa	Known RBP eCLIP	12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	NCKAP1L	P55160	1127 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	ATP2C1	P98194	919 aa	Predicted RBP	12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	FCHO2	Q0JRZ9	810 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	MYBPC2	Q14324	1141 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	KYAT1	Q16773	422 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	RILPL1	Q5EBL4	403 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	SPATA1	Q5VX52	437 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	TXNDC11	Q6PKC3	985 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	GAREM2	Q75VX8	874 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	KCTD17	Q8N5Z5	321 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	TTC9B	Q8N6N2	239 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	KIF2C	Q99661	725 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	ZHX3	Q9H4I2	956 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	KCND2	Q9NZV8	630 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	ASB3	Q9Y575	518 aa		12.34	□□□□□ -0.43
PTP4A2-211	ENST00000528840	ZNF292	O60281	2723 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	MYBPHL	A2RUH7	354 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	MTMR11	A4FU01	709 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	TULP1	O00294	542 aa	Predicted RBP	12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	HNRNPDL	O14979	420 aa	Known RBP	12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	OGT	O15294	1046 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	ODC1	P11926	461 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	HOXC13	P31276	330 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	PON2	Q15165	354 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	MGAT5B	Q3V5L5	792 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	ARHGAP29	Q52LW3	1261 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	ARHGAP15	Q53QZ3	475 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	WDR44	Q5JSH3	913 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	DGKK	Q5KSL6	1271 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	C9orf57	Q5W0N0	161 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	JADE1	Q6IE81	842 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	C1orf228	Q6PIY5	440 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840		Q6ZS52	159 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	ITIH5	Q86UX2	942 aa		12.33	□□□□□ -0.44
PTP4A2-211	ENST00000528840	LONP2	Q86WA8	852 aa		12.33	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms