RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 HLA-DRAP01903 254 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 ICAM1P05362 532 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 HIST1H2AGP0C0S8 130 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-219ENST00000528621 MYL2P10916 166 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 HIST1H2ADP20671 130 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 RFX5P48382 616 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-219ENST00000528621 SETD3Q86TU7 594 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-219ENST00000528621 C3orf20Q8ND61 904 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 GMCL1P1Q8NEA9 526 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 KCNV2Q8TDN2 545 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 USP33Q8TEY7 942 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 HIST1H2AHQ96KK5 128 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 SEPT5Q99719 369 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-219ENST00000528621 HIST1H2AJQ99878 128 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 H2AFJQ9BTM1 129 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 VPS33BQ9H267 617 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 CDYLQ9Y232 598 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 VPS9D1Q9Y2B5 631 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 C17orf102A2RUQ5 167 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 SPDYE5A6NIY4 337 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 SUPT3HO75486 399 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 GFAPP14136 432 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 CHN1P15882 459 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 KCNA4P22459 653 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 SPRP35270 261 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-219ENST00000528621 SESN2P58004 480 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-219ENST00000528621 SPDYE7PQ495Y7 208 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 ZNF484Q5JVG2 852 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 GPRC5AQ8NFJ5 357 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 PTPRN2Q92932 1015 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 TMEM106CQ9BVX2 250 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 RNF103-CHMP3A0A140T963 221 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 MEFVO15553 781 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-219ENST00000528621 CTSHP09668 335 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 PTK6Q13882 451 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 PPIL6Q8IXY8 311 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 TEX9Q8N6V9 391 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 ZNF555Q8NEP9 628 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 LRRIQ1Q96JM4 1722 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 CYP4F11Q9HBI6 524 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 AIPL1Q9NZN9 384 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 WARS2Q9UGM6 360 aaKnown RBP8.89□□□□□ -0.99
CTNND1-219ENST00000528621 ZC3H7BQ9UGR2 993 aaKnown RBP8.89□□□□□ -0.99
CTNND1-219ENST00000528621 KIAA1257Q9ULG3 409 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 TCP11X1B4DZS4 312 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 RGL2O15211 777 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 CDH2P19022 906 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-219ENST00000528621 VCPP55072 806 aaKnown RBP8.89□□□□□ -0.99
CTNND1-219ENST00000528621 LRRC23Q53EV4 343 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-219ENST00000528621 ZC2HC1CQ53FD0 456 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-219ENST00000528621 IL31Q6EBC2 164 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 GRAMD4Q6IC98 578 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 CCNI2Q6ZMN8 369 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-219ENST00000528621 SNX31Q8N9S9 440 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 FEZF2Q8TBJ5 459 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 SCFD2Q8WU76 684 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 KCNB2Q92953 911 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 WDR24Q96S15 920 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 PPP2R3BQ9Y5P8 575 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 NWD1Q149M9 1564 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 SUPT3HB4E1H0 165 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 H7C4K7 107 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 ENO1P06733 434 aaKnown RBP8.89□□□□□ -0.99
CTNND1-219ENST00000528621 POLBP06746 335 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 HMBSP08397 361 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 HOXC6P09630 235 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 LONRF1Q17RB8 773 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 ACAD10Q6JQN1 1059 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 SLC7A14Q8TBB6 771 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 RBM15Q96T37 977 aaKnown RBP eCLIP8.89□□□□□ -0.992e-7■■□□□ 13.5
CTNND1-219ENST00000528621 KCNF1Q9H3M0 494 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 CLCA2Q9UQC9 943 aa8.89□□□□□ -0.99
CTNND1-219ENST00000528621 PDGFRBP09619 1106 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 SLC2A3P11169 496 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 FNTAP49354 379 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 STX3Q13277 289 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 UGT3A1Q6NUS8 523 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 PKN3Q6P5Z2 889 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 STX19Q8N4C7 294 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 ETNK1Q9HBU6 452 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 SH3BP1Q9Y3L3 701 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 DEPDC5O75140 1603 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 FAM47DPA6NHR8 397 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 PPP1R3GB7ZBB8 358 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 MYO1CO00159 1063 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 HSPA1AP0DMV8 641 aaKnown RBP8.88□□□□□ -0.99
CTNND1-219ENST00000528621 HSPA1BP0DMV9 641 aaKnown RBP8.88□□□□□ -0.99
CTNND1-219ENST00000528621 RARBP10826 455 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 RALBP11234 206 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 ODC1P11926 461 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 PTK7Q13308 1070 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 ZC3H12BQ5HYM0 836 aaKnown RBP8.88□□□□□ -0.99
CTNND1-219ENST00000528621 SYCP2LQ5T4T6 812 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 USP13Q92995 863 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-219ENST00000528621 EHD4Q9H223 541 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 GGA3Q9NZ52 723 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 SELENONQ9NZV5 590 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 TBX20Q9UMR3 447 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 NDUFS3O75489 264 aa8.88□□□□□ -0.99
CTNND1-219ENST00000528621 ASMTLO95671 621 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms