RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 CDC25CP30307 473 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 MAGEA4P43358 317 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 TFAMQ00059 246 aaKnown RBP7.89□□□□□ -1.15
C11orf54-207ENST00000528288 CENPCQ03188 943 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 ZNF252P-AS1Q0IIN9 211 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 DNAJC3Q13217 504 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 KLF1Q13351 362 aaPredicted RBP7.89□□□□□ -1.15
C11orf54-207ENST00000528288 SPDYCQ5MJ68 293 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 TMEM63BQ5T3F8 832 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 CGB2Q6NT52 195 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 USP37Q86T82 979 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 THNSL1Q8IYQ7 743 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 EMC1Q8N766 993 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 CEP120Q8N960 986 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 MCPH1Q8NEM0 835 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 AGBL3Q8NEM8 1001 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 TRAPPC12Q8WVT3 735 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 TRAIPQ9BWF2 469 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 ZNF302Q9NR11 478 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 ZNF214Q9UL59 606 aaPredicted RBP7.89□□□□□ -1.15
C11orf54-207ENST00000528288 COL2A1P02458 1487 aaPredicted RBP7.89□□□□□ -1.15
C11orf54-207ENST00000528288 A0A1W2PPM1 405 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 SGK1O00141 431 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 IGF2BP3O00425 579 aaKnown RBP eCLIP7.89□□□□□ -1.15
C11orf54-207ENST00000528288 CD19P15391 556 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 PECAM1P16284 738 aaPredicted RBP7.89□□□□□ -1.15
C11orf54-207ENST00000528288 GARTP22102 1010 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 PSMD6Q15008 389 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 PKN2Q16513 984 aaKnown RBP7.89□□□□□ -1.15
C11orf54-207ENST00000528288 TNFAIP8L3Q5GJ75 292 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 ZBED8Q8IZ13 594 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 FITM2Q8N6M3 262 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.89□□□□□ -1.15
C11orf54-207ENST00000528288 TFAP2BQ92481 460 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 ZBED3Q96IU2 234 aaPredicted RBP7.89□□□□□ -1.15
C11orf54-207ENST00000528288 PICK1Q9NRD5 415 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 PCSK1NQ9UHG2 260 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 POLIQ9UNA4 740 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 NEU2Q9Y3R4 380 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 USP15Q9Y4E8 981 aaPredicted RBP7.89□□□□□ -1.15
C11orf54-207ENST00000528288 EXOC1LA0A1B0GW35 172 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 CHUKO15111 745 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 MAP3K6O95382 1288 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 KRT19P08727 400 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 SUPT20HL2P0C7V6 817 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 KRT15P19012 456 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 CDH8P55286 799 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 MGAT5Q09328 741 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 TAF5Q15542 800 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 ZNF568Q3ZCX4 644 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 SUPT20HL1Q3ZLR7 823 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 LACTB2Q53H82 288 aaPredicted RBP7.89□□□□□ -1.15
C11orf54-207ENST00000528288 FKBP1CQ5VVH2 108 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 GPAT2Q6NUI2 795 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 C3orf20Q8ND61 904 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 ZNF280CQ8ND82 737 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 FEZF2Q8TBJ5 459 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 GPRASP2Q96D09 838 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 SERPINB12Q96P63 405 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 TACO1Q9BSH4 297 aaKnown RBP7.89□□□□□ -1.15
C11orf54-207ENST00000528288 STMN4Q9H169 189 aaPredicted RBP7.89□□□□□ -1.15
C11orf54-207ENST00000528288 NOD2Q9HC29 1040 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 KIAA1217Q5T5P2 1943 aa7.89□□□□□ -1.15
C11orf54-207ENST00000528288 PMM2O15305 246 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 ATP6V1G2O95670 118 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 GBP1P32455 592 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 WDR4P57081 412 aaKnown RBP7.88□□□□□ -1.15
C11orf54-207ENST00000528288 RNASELQ05823 741 aaKnown RBP7.88□□□□□ -1.15
C11orf54-207ENST00000528288 TMEM132AQ24JP5 1023 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 MFSD5Q6N075 450 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 ARMC9Q7Z3E5 817 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 SPATA21Q7Z572 469 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 ANKRD35Q8N283 1001 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 STAMBPL1Q96FJ0 436 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 TIPINQ9BVW5 301 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 CD48P09326 243 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 PTPRAP18433 802 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 GDF10P55107 478 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 NCALDP61601 193 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 PTP4A2Q12974 167 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 XKR3Q5GH77 459 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 ANGEL2Q5VTE6 544 aaKnown RBP7.88□□□□□ -1.15
C11orf54-207ENST00000528288 GRK7Q8WTQ7 553 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 PRPF31Q8WWY3 499 aaKnown RBP7.88□□□□□ -1.15
C11orf54-207ENST00000528288 TMEM109Q9BVC6 243 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 NSRP1Q9H0G5 558 aaKnown RBP7.88□□□□□ -1.15
C11orf54-207ENST00000528288 AVENQ9NQS1 362 aaPredicted RBP7.88□□□□□ -1.15
C11orf54-207ENST00000528288 NKIRAS1Q9NYS0 192 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 GRID1Q9ULK0 1009 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 AFG3L2Q9Y4W6 797 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 KRT16P08779 473 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 KLRC2P26717 231 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 MAP2K2P36507 400 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 SLC1A1P43005 524 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 ALDH5A1P51649 535 aaPredicted RBP7.88□□□□□ -1.15
C11orf54-207ENST00000528288 SNRPFP62306 86 aaKnown RBP7.88□□□□□ -1.15
C11orf54-207ENST00000528288 MAP3K10Q02779 954 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 PDIA2Q13087 525 aaKnown RBP7.88□□□□□ -1.15
C11orf54-207ENST00000528288 XRCC4Q13426 336 aa7.88□□□□□ -1.15
C11orf54-207ENST00000528288 CAPSQ13938 189 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms