RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 M0R296 226 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 CYB561D2O14569 222 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 N4BP1O75113 896 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 ZNF202O95125 648 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 SEC24AO95486 1093 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 LRG1P02750 347 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 LAMP2P13473 410 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 CPB1P15086 417 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 PTPN2P17706 415 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 COL9A1P20849 921 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 RBP5P82980 135 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 ADCY1Q08828 1119 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 STK4Q13043 487 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 POTEHQ6S545 545 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 KRBA2Q6ZNG9 492 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 METTL23Q86XA0 190 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 CBWD2Q8IUF1 395 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 NELFCDQ8IXH7 590 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 LRRC52Q8N7C0 313 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 C1orf127Q8N9H9 656 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 XXYLT1Q8NBI6 393 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 CXorf38Q8TB03 319 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 NOC3LQ8WTT2 800 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 CCDC47Q96A33 483 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 CCDC34Q96HJ3 373 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 MYADMQ96S97 322 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 KCNK12Q9HB15 430 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 CYP4F11Q9HBI6 524 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 INTS13Q9NVM9 706 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 DNMT3BQ9UBC3 853 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 HSFX1Q9UBD0 423 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 POLIQ9UNA4 740 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 AGAP1Q9UPQ3 857 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 CLIC2O15247 247 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 PRPF40AO75400 957 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 RPN1P04843 607 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 ITGB3P05106 788 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 ASGR2P07307 311 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 TMEM191BP0C7N4 346 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 POLR2BP30876 1174 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 SMARCB1Q12824 385 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 TDGQ13569 410 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 SNRNP35Q16560 246 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 DUOXA2Q1HG44 320 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 RNF19BQ6ZMZ0 732 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 WDR49Q8IV35 697 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 THEM5Q8N1Q8 247 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 CSGALNACT2Q8N6G5 542 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 KIAA0895Q8NCT3 520 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 SPATA18Q8TC71 538 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 ASIC4Q96FT7 647 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 ANKRD36BP1Q96IX9 119 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 MFSD14AQ96MC6 490 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 GDPD2Q9HCC8 539 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 GDAP2Q9NXN4 497 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 CDH7Q9ULB5 785 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 ARIH1Q9Y4X5 557 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 INSL5Q9Y5Q6 135 aa13.06□□□□□ -0.32
TRAPPC4-209ENST00000528230 GOLGA6L4A6NEF3 574 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 ANHXE9PGG2 379 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 PDXKO00764 312 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 MICAL2O94851 1124 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 RHOBTB3O94955 611 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 KIF20AO95235 890 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 TNNC2P02585 160 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 NTHL1P78549 312 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 DPYDQ12882 1025 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 KCNB1Q14721 858 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 PSMD6Q15008 389 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 PABPC1LQ4VXU2 614 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 CENPPQ6IPU0 288 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 HFE2Q6ZVN8 426 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 GET4Q7L5D6 327 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 SLC9A9Q8IVB4 645 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 ELMOD1Q8N336 334 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 LEMD2Q8NC56 503 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 PBXIP1Q96AQ6 731 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 ZNF512Q96ME7 567 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 GOLPH3LQ9H4A5 285 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 DMAC2Q9NW81 257 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 HCFC1R1Q9NWW0 138 aa13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 R3HCC1Q9Y3T6 440 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-209ENST00000528230 TULP1O00294 542 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 ZNF197O14709 1029 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 VNN2O95498 520 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 RHOP08100 348 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 KRT19P08727 400 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 CYP2J2P51589 502 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 CYP24A1Q07973 514 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 MYO1EQ12965 1108 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 PLD1Q13393 1074 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 WSCD1Q658N2 575 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 IQCEQ6IPM2 695 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 DPH6Q7L8W6 267 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 TMEM86AQ8N2M4 240 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 SLC44A3Q8N4M1 653 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 RDH13Q8NBN7 331 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 OR5B17Q8NGF7 314 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 OR10T2Q8NGX3 314 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 C2orf15Q8WU43 125 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms