RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 ELOA3CA0A087WX78 387 aaPredicted RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 IQANK1A0A1B0GTG1 560 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 TTC26A0AVF1 554 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 PABPN1LA6NDY0 278 aaKnown RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 CCDC160A6NGH7 325 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 ELOA3DA6NLF2 546 aaPredicted RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 LGALS16A8MUM7 142 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 FADS2P1A8MWK0 482 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 DCDC2CA8MYV0 355 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 KCNJ18B7U540 433 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 H3BRB1 525 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 DDX3XO00571 662 aaKnown RBP eCLIP6.13□□□□□ -1.43
CD44-225ENST00000527326 RGS13O14921 159 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 AREL1O15033 823 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 RNF113AO15541 343 aaKnown RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 CCDC22O60826 627 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 RNASEH1O60930 286 aaKnown RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 TBX10O75333 385 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 KRT36O76013 467 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 MOCS3O95396 460 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 CRYZL1O95825 349 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 CHEK2O96017 543 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 S100BP04271 92 aaPredicted RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 UBTFL1P0CB47 393 aaPredicted RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 ESRRAP11474 423 aaPredicted RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 UQCRBP14927 111 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 LMNB1P20700 586 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 IL32P24001 234 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 EEF1GP26641 437 aaKnown RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 MARCKSP29966 332 aaPredicted RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 GRIA2P42262 883 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 STAT2P52630 851 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 AP3M2P53677 418 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 GJA9P57773 515 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 PSMA6P60900 246 aaKnown RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 ATP6V0D1P61421 351 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 AP2B1P63010 937 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 IRX4P78413 519 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 UBXN1Q04323 297 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 NIPAL4Q0D2K0 466 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 KCNJ12Q14500 433 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 TNIP1Q15025 636 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 EPHA7Q15375 998 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 PPP2R5EQ16537 467 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 ELOA3BQ3SY89 546 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 SGO2Q562F6 1265 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 TNFAIP8L3Q5GJ75 292 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 TCP11X2Q5H9J9 407 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 MFSD5Q6N075 450 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 WDR59Q6PJI9 974 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 DCDC5Q6ZRR9 648 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 ARHGAP27Q6ZUM4 889 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 ANO5Q75V66 913 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 MIGA2Q7L4E1 593 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 KRT28Q7Z3Y7 464 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 WAPLQ7Z5K2 1190 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 ECHDC2Q86YB7 292 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 MMAAQ8IVH4 418 aaKnown RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 CSGALNACT2Q8N6G5 542 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 USP38Q8NB14 1042 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 ELOA3Q8NG57 546 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 LILRB4Q8NHJ6 448 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 PRPF31Q8WWY3 499 aaKnown RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 SEC14L1Q92503 715 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 PEX13Q92968 403 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 ARHGEF2Q92974 986 aaKnown RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 ERP27Q96DN0 273 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 AIFM3Q96NN9 605 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 INPP4AQ96PE3 977 aaPredicted RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 LRRC37BQ96QE4 947 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 GPATCH1Q9BRR8 931 aaKnown RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 RIOK1Q9BRS2 568 aaKnown RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 TXLNGYQ9BZA5 131 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 SHCBP1LQ9BZQ2 653 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 ROPN1BQ9BZX4 212 aaPredicted RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 CUEDC2Q9H467 287 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 Q9H521 79 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 TUT1Q9H6E5 874 aaKnown RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 AZI2Q9H6S1 392 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 CAAP1Q9H8G2 361 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 ROPN1Q9HAT0 212 aaPredicted RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 TCF7L2Q9NQB0 619 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 DDX18Q9NVP1 670 aaKnown RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 LRWD1Q9UFC0 647 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 SEPT3Q9UH03 358 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 EGFL7Q9UHF1 273 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 ATPIF1Q9UII2 106 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 TSPYL4Q9UJ04 414 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 GGT7Q9UJ14 662 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 GNPTGQ9UJJ9 305 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 HAO1Q9UJM8 370 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 KIAA1257Q9ULG3 409 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 TRAF3IP3Q9Y228 551 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 ZNF652Q9Y2D9 606 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 TMA7Q9Y2S6 64 aaKnown RBP6.13□□□□□ -1.43
CD44-225ENST00000527326 IFT52Q9Y366 437 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 STARD13Q9Y3M8 1113 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 PCDHA13Q9Y5I0 950 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 AK5Q9Y6K8 562 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 SQORQ9Y6N5 450 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms