RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 KINO60870 393 aaKnown RBP12.09□□□□□ -0.47
CTSB-214ENST00000527243 KIF20AO95235 890 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 ITGB3P05106 788 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 PNPLA4P41247 253 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 YWHAHQ04917 246 aaPredicted RBP12.09□□□□□ -0.47
CTSB-214ENST00000527243 DUOXA2Q1HG44 320 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 CTXN3Q4LDR2 81 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 ATAT1Q5SQI0 421 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 ZNF658Q5TYW1 1059 aaPredicted RBP12.09□□□□□ -0.47
CTSB-214ENST00000527243 TPGS2Q68CL5 300 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 DSTYKQ6XUX3 929 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 RTL10Q7L3V2 364 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 TRAPPC11Q7Z392 1133 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 ZC3H3Q8IXZ2 948 aaKnown RBP12.09□□□□□ -0.47
CTSB-214ENST00000527243 RDH13Q8NBN7 331 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 PARD3BQ8TEW8 1205 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 NOC3LQ8WTT2 800 aaKnown RBP12.09□□□□□ -0.47
CTSB-214ENST00000527243 KHSRPQ92945 711 aaKnown RBP eCLIP12.09□□□□□ -0.47
CTSB-214ENST00000527243 RIPOR3Q96MK2 946 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 ZNF560Q96MR9 790 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 POP1Q99575 1024 aaKnown RBP12.09□□□□□ -0.47
CTSB-214ENST00000527243 OXCT2Q9BYC2 517 aaPredicted RBP12.09□□□□□ -0.47
CTSB-214ENST00000527243 PRKD2Q9BZL6 878 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 TSPY26PQ9H489 355 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 RMND1Q9NWS8 449 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 GDAP2Q9NXN4 497 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 AGAP1Q9UPQ3 857 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 MAPK8IP1Q9UQF2 711 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 ARHGEF37A1IGU5 675 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 OR6C75A6NL08 312 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 KPNA7A9QM74 516 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 CYB561D2O14569 222 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 CALUO43852 315 aaPredicted RBP12.08□□□□□ -0.48
CTSB-214ENST00000527243 SMC2O95347 1197 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 SEC24AO95486 1093 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 C8AP07357 584 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 HNRNPA1P09651 372 aaKnown RBP eCLIP12.08□□□□□ -0.48
CTSB-214ENST00000527243 TMEM191BP0C7N4 346 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 ODC1P11926 461 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 ATF2P15336 505 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 BMP6P22004 513 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 PRCPP42785 496 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 RBP5P82980 135 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 UVSSAQ2YD98 709 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 EDRF1Q3B7T1 1238 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 SV2CQ496J9 727 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 C1orf220Q5T0J3 134 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 WSCD1Q658N2 575 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 OVOS1Q6IE37 1185 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 CENPPQ6IPU0 288 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 ELMSAN1Q6PJG2 1045 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 TCEAL8Q8IYN2 117 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 CSGALNACT2Q8N6G5 542 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 OR10T2Q8NGX3 314 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 TMC2Q8TDI7 906 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 SMARCE1Q969G3 411 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 ANKRD36BP1Q96IX9 119 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 WDR6Q9NNW5 1121 aaKnown RBP12.08□□□□□ -0.48
CTSB-214ENST00000527243 AFF4Q9UHB7 1163 aaKnown RBP12.08□□□□□ -0.48
CTSB-214ENST00000527243 MAN1B1Q9UKM7 699 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 DSEQ9UL01 958 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 MAFFQ9ULX9 164 aa12.08□□□□□ -0.48
CTSB-214ENST00000527243 MTCL1Q9Y4B5 1905 aaKnown RBP12.07□□□□□ -0.48
CTSB-214ENST00000527243 SYCE3A1L190 88 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 LRRIQ3A6PVS8 624 aaPredicted RBP12.07□□□□□ -0.48
CTSB-214ENST00000527243 AKAP3O75969 853 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 STAU1O95793 577 aaKnown RBP12.07□□□□□ -0.48
CTSB-214ENST00000527243 CST3P01034 146 aaPredicted RBP12.07□□□□□ -0.48
CTSB-214ENST00000527243 TNNC2P02585 160 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 C4BPAP04003 597 aaKnown RBP12.07□□□□□ -0.48
CTSB-214ENST00000527243 DLATP10515 647 aaKnown RBP12.07□□□□□ -0.48
CTSB-214ENST00000527243 ENPEPQ07075 957 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 GPR17Q13304 367 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 LIN9Q5TKA1 542 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 USP37Q86T82 979 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 GAS2L3Q86XJ1 694 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 ADSSL1Q8N142 457 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 SLC7A14Q8TBB6 771 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 SMG7Q92540 1137 aaKnown RBP12.07□□□□□ -0.48
CTSB-214ENST00000527243 CCDC127Q96BQ5 260 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 TRIM44Q96DX7 344 aaPredicted RBP12.07□□□□□ -0.48
CTSB-214ENST00000527243 FNBP1Q96RU3 617 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 TMEM209Q96SK2 561 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 GTPBP4Q9BZE4 634 aaKnown RBP12.07□□□□□ -0.48
CTSB-214ENST00000527243 XYLT2Q9H1B5 865 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 HOOK1Q9UJC3 728 aaKnown RBP12.07□□□□□ -0.48
CTSB-214ENST00000527243 L1RE1Q9UN81 338 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 USTQ9Y2C2 406 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 TSC2P49815 1807 aa12.07□□□□□ -0.48
CTSB-214ENST00000527243 C2CD4DB7Z1M9 353 aa12.06□□□□□ -0.48
CTSB-214ENST00000527243 GABRDO14764 452 aa12.06□□□□□ -0.48
CTSB-214ENST00000527243 N4BP1O75113 896 aaKnown RBP12.06□□□□□ -0.48
CTSB-214ENST00000527243 OR4Q2P0C623 313 aa12.06□□□□□ -0.48
CTSB-214ENST00000527243 CD44P16070 742 aaKnown RBP12.06□□□□□ -0.48
CTSB-214ENST00000527243 TNNI1P19237 187 aa12.06□□□□□ -0.48
CTSB-214ENST00000527243 NR2F2P24468 414 aa12.06□□□□□ -0.48
CTSB-214ENST00000527243 PMS1P54277 932 aaKnown RBP12.06□□□□□ -0.48
CTSB-214ENST00000527243 DLG4P78352 724 aa12.06□□□□□ -0.48
CTSB-214ENST00000527243 MORC3Q14149 939 aa12.06□□□□□ -0.48
CTSB-214ENST00000527243 TDRD10Q5VZ19 366 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms