RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 PROZP22891 400 aa17.78■□□□□ 0.44
CHMP4A-203ENST00000527154 AARSP49588 968 aaKnown RBP eCLIP17.78■□□□□ 0.44
CHMP4A-203ENST00000527154 PPP2R5AQ15172 486 aa17.78■□□□□ 0.44
CHMP4A-203ENST00000527154 CALCRLQ16602 461 aa17.78■□□□□ 0.44
CHMP4A-203ENST00000527154 ITPRIPL2Q3MIP1 535 aa17.78■□□□□ 0.44
CHMP4A-203ENST00000527154 HAUS6Q7Z4H7 955 aa17.78■□□□□ 0.44
CHMP4A-203ENST00000527154 FAM200AQ8TCP9 573 aa17.78■□□□□ 0.44
CHMP4A-203ENST00000527154 PSMG2Q969U7 264 aa17.78■□□□□ 0.44
CHMP4A-203ENST00000527154 TBC1D32Q96NH3 1257 aa17.78■□□□□ 0.44
CHMP4A-203ENST00000527154 POLR3CQ9BUI4 534 aaPredicted RBP17.78■□□□□ 0.44
CHMP4A-203ENST00000527154 KIFC3Q9BVG8 833 aa17.78■□□□□ 0.44
CHMP4A-203ENST00000527154 PCDHB8Q9UN66 801 aa17.78■□□□□ 0.44
CHMP4A-203ENST00000527154 LHX6Q9UPM6 363 aa17.78■□□□□ 0.44
CHMP4A-203ENST00000527154 ASB3Q9Y575 518 aa17.78■□□□□ 0.44
CHMP4A-203ENST00000527154 MED24O75448 989 aa17.77■□□□□ 0.44
CHMP4A-203ENST00000527154 CAVIN2O95810 425 aa17.77■□□□□ 0.44
CHMP4A-203ENST00000527154 NR5A1Q13285 461 aa17.77■□□□□ 0.44
CHMP4A-203ENST00000527154 GPR17Q13304 367 aa17.77■□□□□ 0.44
CHMP4A-203ENST00000527154 KARSQ15046 597 aaKnown RBP17.77■□□□□ 0.44
CHMP4A-203ENST00000527154 CPLX2Q6PUV4 134 aaKnown RBP17.77■□□□□ 0.44
CHMP4A-203ENST00000527154 APBB1IPQ7Z5R6 666 aaPredicted RBP17.77■□□□□ 0.44
CHMP4A-203ENST00000527154 TTC8Q8TAM2 541 aa17.77■□□□□ 0.44
CHMP4A-203ENST00000527154 ZCCHC14Q8WYQ9 949 aaKnown RBP17.77■□□□□ 0.44
CHMP4A-203ENST00000527154 NACC1Q96RE7 527 aa17.77■□□□□ 0.44
CHMP4A-203ENST00000527154 ACO2Q99798 780 aaKnown RBP17.77■□□□□ 0.44
CHMP4A-203ENST00000527154 HPS4Q9NQG7 708 aa17.77■□□□□ 0.44
CHMP4A-203ENST00000527154 HSFX1Q9UBD0 423 aa17.77■□□□□ 0.44
CHMP4A-203ENST00000527154 SLC8A2Q9UPR5 921 aa17.77■□□□□ 0.44
CHMP4A-203ENST00000527154 NUB1Q9Y5A7 615 aa17.77■□□□□ 0.44
CHMP4A-203ENST00000527154 FAM221BA6H8Z2 402 aa17.76■□□□□ 0.43
CHMP4A-203ENST00000527154 OTOL1A6NHN0 477 aaPredicted RBP17.76■□□□□ 0.43
CHMP4A-203ENST00000527154 RHOBTB1O94844 696 aa17.76■□□□□ 0.43
CHMP4A-203ENST00000527154 FGF19O95750 216 aa17.76■□□□□ 0.43
CHMP4A-203ENST00000527154 CPB1P15086 417 aa17.76■□□□□ 0.43
CHMP4A-203ENST00000527154 MCM2P49736 904 aa17.76■□□□□ 0.43
CHMP4A-203ENST00000527154 YARSP54577 528 aaKnown RBP17.76■□□□□ 0.43
CHMP4A-203ENST00000527154 ELF2Q15723 593 aa17.76■□□□□ 0.43
CHMP4A-203ENST00000527154 TMEM132AQ24JP5 1023 aa17.76■□□□□ 0.43
CHMP4A-203ENST00000527154 CENPPQ6IPU0 288 aa17.76■□□□□ 0.43
CHMP4A-203ENST00000527154 PADI6Q6TGC4 694 aa17.76■□□□□ 0.43
CHMP4A-203ENST00000527154 SYT13Q7L8C5 426 aa17.76■□□□□ 0.43
CHMP4A-203ENST00000527154 C18orf25Q96B23 403 aaPredicted RBP17.76■□□□□ 0.43
CHMP4A-203ENST00000527154 CCDC94Q9BW85 323 aaPredicted RBP17.76■□□□□ 0.43
CHMP4A-203ENST00000527154 IL21Q9HBE4 155 aa17.76■□□□□ 0.43
CHMP4A-203ENST00000527154 MSRB2Q9Y3D2 182 aa17.76■□□□□ 0.43
CHMP4A-203ENST00000527154 XBP1P17861 261 aa17.75■□□□□ 0.43
CHMP4A-203ENST00000527154 EPHB3P54753 998 aa17.75■□□□□ 0.43
CHMP4A-203ENST00000527154 SCRN1Q12765 414 aa17.75■□□□□ 0.43
CHMP4A-203ENST00000527154 GRSF1Q12849 480 aaKnown RBP eCLIP17.75■□□□□ 0.43
CHMP4A-203ENST00000527154 DUSP4Q13115 394 aa17.75■□□□□ 0.43
CHMP4A-203ENST00000527154 PTPAQ15257 358 aa17.75■□□□□ 0.43
CHMP4A-203ENST00000527154 PMS2CLQ68D20 193 aa17.75■□□□□ 0.43
CHMP4A-203ENST00000527154 TAS1R3Q7RTX0 852 aa17.75■□□□□ 0.43
CHMP4A-203ENST00000527154 DNAJB7Q7Z6W7 309 aaPredicted RBP17.75■□□□□ 0.43
CHMP4A-203ENST00000527154 TASP1Q9H6P5 420 aa17.75■□□□□ 0.43
CHMP4A-203ENST00000527154 PCNX2A6NKB5 2137 aa17.75■□□□□ 0.43
CHMP4A-203ENST00000527154 ASCC3Q8N3C0 2202 aaKnown RBP17.75■□□□□ 0.43
CHMP4A-203ENST00000527154 SETXQ7Z333 2677 aaKnown RBP17.75■□□□□ 0.43
CHMP4A-203ENST00000527154 DPYSL4O14531 572 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 NEMFO60524 1076 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 RNF40O75150 1001 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 MCF2P10911 925 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 MUTP22033 750 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 RPA1P27694 616 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 LRPAP1P30533 357 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 MCM4P33991 863 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 TXKP42681 527 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 YWHAHQ04917 246 aaPredicted RBP17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 FBXO43Q4G163 708 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 GPR158Q5T848 1215 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 GPIHBP1Q8IV16 184 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 COL26A1Q96A83 441 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 TMEM134Q9H6X4 195 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 FBRSL1Q9HCM7 1045 aaKnown RBP17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 TMEM9BQ9NQ34 198 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 POLR3BQ9NW08 1133 aaPredicted RBP17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 ARHGAP28Q9P2N2 729 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 ZMYM5Q9UJ78 669 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 TBX20Q9UMR3 447 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 NUP205Q92621 2012 aa17.74■□□□□ 0.43
CHMP4A-203ENST00000527154 CACNA1EQ15878 2313 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 PHLPP2Q6ZVD8 1323 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 MTMR11A4FU01 709 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 OR6C75A6NL08 312 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 DCLK1O15075 740 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 CDKL5O76039 1030 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 EGFP01133 1207 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 DRD1P21728 446 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 GABRR2P28476 465 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 CREB5Q02930 508 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 RUNX3Q13761 415 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 MYBPC2Q14324 1141 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 SLC10A6Q3KNW5 377 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 EZH1Q92800 747 aaPredicted RBP17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 KIFAP3Q92845 792 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 ACAP3Q96P50 834 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 HHIPQ96QV1 700 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 TM6SF1Q9BZW5 370 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 TMEM60Q9H2L4 133 aa17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 ATXN3LQ9H3M9 355 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms