RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 WHAMMQ8TF30 809 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 MYLIPQ8WY64 445 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 PIK3R5Q8WYR1 880 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 NAP1L5Q96NT1 182 aaPredicted RBP11.58□□□□□ -0.56
NEDD8-205ENST00000527046 KLHL5Q96PQ7 755 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 TMEM209Q96SK2 561 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 TCF25Q9BQ70 676 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 TTPALQ9BTX7 342 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 BCO2Q9BYV7 579 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 NAT10Q9H0A0 1025 aaKnown RBP11.58□□□□□ -0.56
NEDD8-205ENST00000527046 RBSNQ9H1K0 784 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 NDST4Q9H3R1 872 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 TSPY26PQ9H489 355 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.58□□□□□ -0.56
NEDD8-205ENST00000527046 TLR9Q9NR96 1032 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 TAB2Q9NYJ8 693 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 SNX9Q9Y5X1 595 aa11.58□□□□□ -0.56
NEDD8-205ENST00000527046 CDH23Q9H251 3354 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 SMTNL1A8MU46 457 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 P4HA2O15460 535 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 TEX33O43247 280 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 CAVIN2O95810 425 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 AFPP02771 609 aaKnown RBP11.57□□□□□ -0.56
NEDD8-205ENST00000527046 RPL17P18621 184 aaKnown RBP11.57□□□□□ -0.56
NEDD8-205ENST00000527046 TYMPP19971 482 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 PAX3P23760 479 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 LMO2P25791 158 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 PON1P27169 355 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 PNPLA4P41247 253 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 ASPAP45381 313 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 MTIF2P46199 727 aaKnown RBP11.57□□□□□ -0.56
NEDD8-205ENST00000527046 MXI1P50539 228 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 COPB1P53618 953 aaKnown RBP11.57□□□□□ -0.56
NEDD8-205ENST00000527046 RBM10P98175 930 aaKnown RBP11.57□□□□□ -0.56
NEDD8-205ENST00000527046 ELAVL2Q12926 359 aaKnown RBP11.57□□□□□ -0.56
NEDD8-205ENST00000527046 BIRC3Q13489 604 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 COL19A1Q14993 1142 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 TPD52L1Q16890 204 aaPredicted RBP11.57□□□□□ -0.56
NEDD8-205ENST00000527046 WDR72Q3MJ13 1102 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 SV2CQ496J9 727 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 VARS2Q5ST30 1063 aaKnown RBP11.57□□□□□ -0.56
NEDD8-205ENST00000527046 PHLDB3Q6NSJ2 640 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 LILRA6Q6PI73 481 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 DPH6Q7L8W6 267 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 LRRTM3Q86VH5 581 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 CREBRFQ8IUR6 639 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 FAM114A1Q8IWE2 563 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 VN1R2Q8NFZ6 395 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 OR10T2Q8NGX3 314 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 FEZF2Q8TBJ5 459 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 SLC22A17Q8WUG5 538 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 RIN2Q8WYP3 895 aaPredicted RBP11.57□□□□□ -0.56
NEDD8-205ENST00000527046 KAT5Q92993 513 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 PKMYT1Q99640 499 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 MRPL45Q9BRJ2 306 aaKnown RBP11.57□□□□□ -0.56
NEDD8-205ENST00000527046 CRACR2AQ9BSW2 395 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 VPS16Q9H269 839 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 MTRRQ9UBK8 725 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 PUF60Q9UHX1 559 aaKnown RBP11.57□□□□□ -0.56
NEDD8-205ENST00000527046 AJAP1Q9UKB5 411 aaPredicted RBP11.57□□□□□ -0.56
NEDD8-205ENST00000527046 BACE2Q9Y5Z0 518 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 PLXNA3P51805 1871 aa11.57□□□□□ -0.56
NEDD8-205ENST00000527046 SF3B1O75533 1304 aaKnown RBP eCLIP11.57□□□□□ -0.564e-7■■■■■ 86.2
NEDD8-205ENST00000527046 PER2O15055 1255 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 TEX28O15482 410 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 STX10O60499 249 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 CLASP2O75122 1294 aaKnown RBP11.56□□□□□ -0.56
NEDD8-205ENST00000527046 PHACTR2O75167 634 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 TACC1O75410 805 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 FAM163BP0C2L3 166 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 GLUD2P49448 558 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 HYAL1Q12794 435 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 TRPC3Q13507 836 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 NR1I3Q14994 352 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 CCDC142Q17RM4 750 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 TCEAL5Q5H9L2 206 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 DSTYKQ6XUX3 929 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 TMC7Q7Z402 723 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 USP37Q86T82 979 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 CEP57Q86XR8 500 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 ARHGEF19Q8IW93 802 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 TOP6BLQ8N6T0 577 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 TAF4BQ92750 862 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 ZNF560Q96MR9 790 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 KREMEN1Q96MU8 473 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 ARID3AQ99856 593 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 LPIN3Q9BQK8 851 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 SMYD3Q9H7B4 428 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 NGRNQ9NPE2 291 aaKnown RBP11.56□□□□□ -0.56
NEDD8-205ENST00000527046 FNIP2Q9P278 1114 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 FBXL5Q9UKA1 691 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 SIK3Q9Y2K2 1263 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 TRANK1O15050 2925 aa11.56□□□□□ -0.56
NEDD8-205ENST00000527046 GTPBP10A4D1E9 387 aaKnown RBP11.55□□□□□ -0.56
NEDD8-205ENST00000527046 C2CD2LO14523 706 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 TRAPPC3O43617 180 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 ATP2C2O75185 946 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 NOL4O94818 638 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 ABLIM3O94929 683 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 CSPG5O95196 566 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms