RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 PPP1R2P3Q6NXS1 205 aa21.61■■□□□ 1.05
SMIM3-201ENST00000526627 ZPBP2Q6X784 338 aa21.61■■□□□ 1.05
SMIM3-201ENST00000526627 RELL1Q8IUW5 271 aa21.61■■□□□ 1.05
SMIM3-201ENST00000526627 CCDC89Q8N998 374 aa21.61■■□□□ 1.05
SMIM3-201ENST00000526627 TMEM120BA0PK00 339 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 CCT8L1PA6NM43 557 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 MSCO60682 206 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 GHRP10912 638 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 EDNRBP24530 442 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 SSR1P43307 286 aaKnown RBP21.6■■□□□ 1.05
SMIM3-201ENST00000526627 ITIH4Q14624 930 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 HIBCHQ6NVY1 386 aaPredicted RBP21.6■■□□□ 1.05
SMIM3-201ENST00000526627 ZNF365Q70YC5 407 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 CYP4X1Q8N118 509 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 SLITRK1Q96PX8 696 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 SLC40A1Q9NP59 571 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 PI4K2BG5E9Z4 385 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 MAFO75444 373 aaPredicted RBP21.6■■□□□ 1.05
SMIM3-201ENST00000526627 KRT10P13645 584 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 OGDHQ02218 1023 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 LRRC14Q15048 493 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 WDR49Q8IV35 697 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 PRPF31Q8WWY3 499 aaKnown RBP21.6■■□□□ 1.05
SMIM3-201ENST00000526627 ELAC2Q9BQ52 826 aaKnown RBP21.6■■□□□ 1.05
SMIM3-201ENST00000526627 NRBP2Q9NSY0 501 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 BTBD7Q9P203 1132 aa21.6■■□□□ 1.05
SMIM3-201ENST00000526627 LTBP3Q9NS15 1303 aa21.59■■□□□ 1.05
SMIM3-201ENST00000526627 SOWAHBA6NEL2 793 aa21.59■■□□□ 1.05
SMIM3-201ENST00000526627 LIASO43766 372 aa21.59■■□□□ 1.05
SMIM3-201ENST00000526627 VIMP08670 466 aaKnown RBP21.59■■□□□ 1.05
SMIM3-201ENST00000526627 BAG6P46379 1132 aa21.59■■□□□ 1.05
SMIM3-201ENST00000526627 STAT5BP51692 787 aa21.59■■□□□ 1.05
SMIM3-201ENST00000526627 SF3A3Q12874 501 aaKnown RBP eCLIP21.59■■□□□ 1.05
SMIM3-201ENST00000526627 MPP2Q14168 576 aa21.59■■□□□ 1.05
SMIM3-201ENST00000526627 TREML2Q5T2D2 321 aa21.59■■□□□ 1.05
SMIM3-201ENST00000526627 LBX2Q6XYB7 198 aa21.59■■□□□ 1.05
SMIM3-201ENST00000526627 ZBTB33Q86T24 672 aa21.59■■□□□ 1.05
SMIM3-201ENST00000526627 RCOR2Q8IZ40 523 aa21.59■■□□□ 1.05
SMIM3-201ENST00000526627 GLIS1Q8NBF1 620 aa21.59■■□□□ 1.05
SMIM3-201ENST00000526627 BBOF1Q8ND07 529 aa21.59■■□□□ 1.05
SMIM3-201ENST00000526627 MTMR12Q9C0I1 747 aa21.59■■□□□ 1.05
SMIM3-201ENST00000526627 ABLIM1O14639 778 aa21.58■■□□□ 1.05
SMIM3-201ENST00000526627 BRD2P25440 801 aaKnown RBP21.58■■□□□ 1.05
SMIM3-201ENST00000526627 MYL6P60660 151 aa21.58■■□□□ 1.05
SMIM3-201ENST00000526627 GRM1Q13255 1194 aa21.58■■□□□ 1.05
SMIM3-201ENST00000526627 MFSD7Q6UXD7 560 aa21.58■■□□□ 1.05
SMIM3-201ENST00000526627 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.58■■□□□ 1.052e-7■■■□□ 17.1
SMIM3-201ENST00000526627 GGA3Q9NZ52 723 aa21.58■■□□□ 1.05
SMIM3-201ENST00000526627 LGALS13Q9UHV8 139 aa21.58■■□□□ 1.05
SMIM3-201ENST00000526627 AP3M2P53677 418 aa21.58■■□□□ 1.04
SMIM3-201ENST00000526627 TXNRD3NBQ6F5E7 133 aa21.58■■□□□ 1.04
SMIM3-201ENST00000526627 WDTC1Q8N5D0 677 aa21.58■■□□□ 1.04
SMIM3-201ENST00000526627 C9orf72Q96LT7 481 aa21.58■■□□□ 1.04
SMIM3-201ENST00000526627 FHDC1Q9C0D6 1143 aaPredicted RBP21.58■■□□□ 1.04
SMIM3-201ENST00000526627 EURLQ9NYK6 297 aa21.58■■□□□ 1.04
SMIM3-201ENST00000526627 DNPEPQ9ULA0 475 aa21.58■■□□□ 1.04
SMIM3-201ENST00000526627 IVNS1ABPQ9Y6Y0 642 aa21.58■■□□□ 1.04
SMIM3-201ENST00000526627 F8VP50 259 aa21.57■■□□□ 1.04
SMIM3-201ENST00000526627 OAS1P00973 400 aaKnown RBP21.57■■□□□ 1.04
SMIM3-201ENST00000526627 PPP1R15BQ5SWA1 713 aa21.57■■□□□ 1.04
SMIM3-201ENST00000526627 MGARPQ8TDB4 240 aa21.57■■□□□ 1.04
SMIM3-201ENST00000526627 ACO2Q99798 780 aaKnown RBP21.57■■□□□ 1.04
SMIM3-201ENST00000526627 IMPG2Q9BZV3 1241 aa21.57■■□□□ 1.04
SMIM3-201ENST00000526627 ATP2C2O75185 946 aa21.57■■□□□ 1.04
SMIM3-201ENST00000526627 TOM1L1O75674 476 aa21.57■■□□□ 1.04
SMIM3-201ENST00000526627 LSM8O95777 96 aaKnown RBP21.57■■□□□ 1.04
SMIM3-201ENST00000526627 ATP5DP30049 168 aa21.57■■□□□ 1.04
SMIM3-201ENST00000526627 PRKG1Q13976 671 aa21.57■■□□□ 1.04
SMIM3-201ENST00000526627 P3H1Q32P28 736 aa21.57■■□□□ 1.04
SMIM3-201ENST00000526627 KAZNQ674X7 775 aa21.57■■□□□ 1.04
SMIM3-201ENST00000526627 CDCA2Q69YH5 1023 aaPredicted RBP21.57■■□□□ 1.04
SMIM3-201ENST00000526627 DRICH1Q6PGQ1 229 aaPredicted RBP21.57■■□□□ 1.04
SMIM3-201ENST00000526627 ZCCHC9Q8N567 271 aaKnown RBP21.57■■□□□ 1.04
SMIM3-201ENST00000526627 MCEEQ96PE7 176 aa21.57■■□□□ 1.04
SMIM3-201ENST00000526627 MRPL4Q9BYD3 311 aaKnown RBP21.57■■□□□ 1.04
SMIM3-201ENST00000526627 CISHQ9NSE2 258 aa21.57■■□□□ 1.04
SMIM3-201ENST00000526627 A0A0G2JMZ2 1700 aa21.57■■□□□ 1.04
SMIM3-201ENST00000526627 KRT1P04264 644 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 CALB1P05937 261 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 TCF7P36402 384 aaPredicted RBP21.56■■□□□ 1.04
SMIM3-201ENST00000526627 LRRC38Q5VT99 294 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 ANKS4BQ8N8V4 417 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 TFAP2BQ92481 460 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 RBM41Q96IZ5 413 aaKnown RBP21.56■■□□□ 1.04
SMIM3-201ENST00000526627 SAMD15Q9P1V8 674 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 NAALADL1Q9UQQ1 740 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 PTPRFP10586 1907 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 SNX3O60493 162 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 ZSCAN5DPP0CG00 497 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 HIRAP54198 1017 aaPredicted RBP21.56■■□□□ 1.04
SMIM3-201ENST00000526627 ZNF394Q53GI3 561 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 TMEM63BQ5T3F8 832 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 FAM160B1Q5W0V3 765 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 SPOCD1Q6ZMY3 1216 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 RIOX2Q8IUF8 465 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 NIF3L1Q9GZT8 377 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 KLC4Q9NSK0 619 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 HAUS2Q9NVX0 235 aa21.56■■□□□ 1.04
SMIM3-201ENST00000526627 CPSF3Q9UKF6 684 aaKnown RBP21.56■■□□□ 1.04
SMIM3-201ENST00000526627 SNCAIPQ9Y6H5 919 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms