RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 HNRNPDLO14979 420 aaKnown RBP12.76□□□□□ -0.37
CAPN1-204ENST00000526468 CLDN3O15551 220 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 MICAL2O94851 1124 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 SEC24BO95487 1268 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 MBD3O95983 291 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 OR4Q2P0C623 313 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 U2AF2P26368 475 aaKnown RBP eCLIP12.76□□□□□ -0.37
CAPN1-204ENST00000526468 CCR3P51677 355 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 GUCY2FP51841 1108 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 RABEP1Q15276 862 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 IL17AQ16552 155 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 SLC10A6Q3KNW5 377 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 MCTP1Q6DN14 999 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 ZPBP2Q6X784 338 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 PRR23BQ6ZRT6 265 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 USP37Q86T82 979 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 GPR161Q8N6U8 529 aaKnown RBP12.76□□□□□ -0.37
CAPN1-204ENST00000526468 TMEM161BQ8NDZ6 487 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 CSGALNACT1Q8TDX6 532 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 SPIRE2Q8WWL2 714 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 FAM3CQ92520 227 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 NELL1Q92832 810 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 SYAP1Q96A49 352 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-204ENST00000526468 BORCS6Q96GS4 357 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 ZSWIM3Q96MP5 696 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 MMTAG2Q9BU76 263 aaKnown RBP12.76□□□□□ -0.37
CAPN1-204ENST00000526468 FAM126AQ9BYI3 521 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-204ENST00000526468 ZNF334Q9HCZ1 680 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-204ENST00000526468 TIMM13Q9Y5L4 95 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-204ENST00000526468 KMT2BQ9UMN6 2715 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-204ENST00000526468 PI4KAP42356 2102 aa12.76□□□□□ -0.37
CAPN1-204ENST00000526468 A0A1W2PRU2 124 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 SLC38A8A6NNN8 435 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 HEPACAM2A8MVW5 462 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 M0QZQ0 153 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 MOSPD3O75425 235 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 TNFSF9P41273 254 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 LIG4P49917 911 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 EPHB3P54753 998 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 EPHA5P54756 1037 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 MCL1Q07820 350 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 STXBP5Q5T5C0 1151 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 DSTYKQ6XUX3 929 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 MAP4K3Q8IVH8 894 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 FAM200AQ8TCP9 573 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 MYO18AQ92614 2054 aaKnown RBP12.75□□□□□ -0.37
CAPN1-204ENST00000526468 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.75□□□□□ -0.37
CAPN1-204ENST00000526468 CCDC39Q9UFE4 941 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 MAFFQ9ULX9 164 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 UBQLN1Q9UMX0 589 aaKnown RBP12.75□□□□□ -0.37
CAPN1-204ENST00000526468 KIF3AQ9Y496 699 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-204ENST00000526468 USP24Q9UPU5 2620 aa12.75□□□□□ -0.37
CAPN1-204ENST00000526468 NPHP3-ACAD11A0A0J9YXS1 232 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 VWA3AA6NCI4 1184 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 H0YCG3 227 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 XPOTO43592 962 aaKnown RBP12.74□□□□□ -0.37
CAPN1-204ENST00000526468 CLTAP09496 248 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 TDGF1P13385 188 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 SDHBP21912 280 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 CCNE1P24864 410 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 LRPAP1P30533 357 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 SOX9P48436 509 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 KPNA1P52294 538 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-204ENST00000526468 NRLP54845 237 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 ATP2C1P98194 919 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-204ENST00000526468 SATB1Q01826 763 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 FZD5Q13467 585 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 LRRC32Q14392 662 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 OVOS1Q6IE37 1185 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-204ENST00000526468 TMC8Q8IU68 726 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 ZNF687Q8N1G0 1237 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 PNMA5Q96PV4 448 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 DNAJC25Q9H1X3 360 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 LMAN1LQ9HAT1 526 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 KCND2Q9NZV8 630 aa12.74□□□□□ -0.37
CAPN1-204ENST00000526468 TTC26A0AVF1 554 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 MTMR11A4FU01 709 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 OR6C75A6NL08 312 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 PRR5-ARHGAP8B1AHC4 643 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 SOAT2O75908 522 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 OAZ2O95190 189 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 VNN2O95498 520 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 PLA2G4BP0C869 781 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 ODC1P11926 461 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 MCM2P49736 904 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 SLC12A3P55017 1021 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 NCKAP1LP55160 1127 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 ARHGAP8P85298 464 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 SPEM2Q0P670 501 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 DUSP4Q13115 394 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 RILPL1Q5EBL4 403 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 HYIQ5T013 277 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 LAIR1Q6GTX8 287 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 Q6ZS52 159 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 GPBP1Q86WP2 473 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 MFSD6LQ8IWD5 586 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 TTC9BQ8N6N2 239 aa12.73□□□□□ -0.37
CAPN1-204ENST00000526468 BEST2Q8NFU1 509 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms