RNA–Protein interactions for RNA: ENST00000526369.3

PPFIA1-208, Transcript of PTPRF interacting protein alpha 1, human

TSL 4

Gene PPFIA1, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-208	ENST00000526369	TFAM	Q00059	246 aa	Known RBP	11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	APBA1	Q02410	837 aa		11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	KIF5A	Q12840	1032 aa		11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	NCOA4	Q13772	614 aa		11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	BTG3	Q14201	252 aa	Predicted RBP	11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	TMEM132D	Q14C87	1099 aa		11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	DUOXA2	Q1HG44	320 aa		11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	C10orf76	Q5T2E6	689 aa		11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	GJB7	Q6PEY0	223 aa		11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	C15orf39	Q6ZRI6	1047 aa		11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	ZNF592	Q92610	1267 aa		11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	ACAP3	Q96P50	834 aa		11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	ALS2CR12	Q96Q35	445 aa		11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	POP1	Q99575	1024 aa	Known RBP	11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	MTMR12	Q9C0I1	747 aa		11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	ASB7	Q9H672	318 aa		11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	ALG13	Q9NP73	1137 aa	Known RBP	11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	LZTFL1	Q9NQ48	299 aa		11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369	PRKAG3	Q9UGI9	489 aa		11.17	□□□□□ -0.62
PPFIA1-208	ENST00000526369		A0A1B0GUA9	196 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	TTLL13P	A6NNM8	815 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	ENPP3	O14638	875 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	MBTPS2	O43462	519 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	NCK2	O43639	380 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	CSDE1	O75534	798 aa	Known RBP	11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	RB1	P06400	928 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	PLEK	P08567	350 aa	Predicted RBP	11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	STAG3L1	P0CL83	205 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	KRT5	P13647	590 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	P4HA1	P13674	534 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	USP8	P40818	1118 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	BMS1	Q14692	1282 aa	Known RBP	11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	LPIN1	Q14693	890 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	SMAD2	Q15796	467 aa	Known RBP	11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	SLC18A3	Q16572	532 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	ZNF699	Q32M78	642 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	SEZ6	Q53EL9	994 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	CCDC122	Q5T0U0	273 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	CDR2L	Q86X02	465 aa	Predicted RBP	11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	GPIHBP1	Q8IV16	184 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	ARHGEF19	Q8IW93	802 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	LMO3	Q8TAP4	145 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	CELF4	Q9BZC1	486 aa	Known RBP	11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	SEPT11	Q9NVA2	429 aa	Known RBP	11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	C2CD2	Q9Y426	696 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	PAXBP1	Q9Y5B6	917 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	CDY2A	Q9Y6F7	541 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	MUC6	Q6W4X9	2439 aa		11.16	□□□□□ -0.62
PPFIA1-208	ENST00000526369	BRWD1	Q9NSI6	2320 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	C5orf67	F2Z3F1	127 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	RPS6KA5	O75582	802 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	LCA5L	O95447	670 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	C4BPA	P04003	597 aa	Known RBP	11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	FGFR4	P22455	802 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	NDUFV1	P49821	464 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	GNG11	P61952	73 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	ETF1	P62495	437 aa	Known RBP	11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	COL19A1	Q14993	1142 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	CTC1	Q2NKJ3	1217 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	PAN2	Q504Q3	1202 aa	Known RBP	11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	FAM26D	Q5JW98	314 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	HGSNAT	Q68CP4	663 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	SMYD5	Q6GMV2	418 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	TWF2	Q6IBS0	349 aa	Known RBP	11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	PHLDB3	Q6NSJ2	640 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	ZNF662	Q6ZS27	426 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	RNF135	Q8IUD6	432 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	REXO1L1P	Q8IX06	675 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	CEP120	Q8N960	986 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	SHC3	Q92529	594 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	TAF4B	Q92750	862 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	SEMA4D	Q92854	862 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	SECISBP2L	Q93073	1101 aa	Known RBP	11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	NIF3L1	Q9GZT8	377 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	LMAN2L	Q9H0V9	348 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	CD207	Q9UJ71	328 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	AJAP1	Q9UKB5	411 aa	Predicted RBP	11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	ITGA11	Q9UKX5	1188 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	DERA	Q9Y315	318 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	RWDD3	Q9Y3V2	267 aa		11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.15	□□□□□ -0.62
PPFIA1-208	ENST00000526369	ANK1	P16157	1881 aa		11.15	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PTPRJ	Q12913	1337 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	GPR182	O15218	404 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	TBX10	O75333	385 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	NFIC	P08651	508 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	KRT19	P08727	400 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	LINC00271	P0C7V0	271 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	CD52	P31358	61 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	CASQ1	P31415	396 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	MAGEA1	P43355	309 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	BPIFB4	P59827	614 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PTK2	Q05397	1052 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	GFPT1	Q06210	699 aa	Predicted RBP	11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PAK2	Q13177	524 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	SMAD4	Q13485	552 aa	Known RBP	11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	CUL2	Q13617	745 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	IFI16	Q16666	785 aa	Known RBP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms