RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 SEPT5Q99719 369 aaPredicted RBP7.16□□□□□ -1.26
CD44-221ENST00000526000 LPIN3Q9BQK8 851 aa7.16□□□□□ -1.26
CD44-221ENST00000526000 MMTAG2Q9BU76 263 aaKnown RBP7.16□□□□□ -1.26
CD44-221ENST00000526000 LRRC3Q9BY71 257 aa7.16□□□□□ -1.26
CD44-221ENST00000526000 FOXP1Q9H334 677 aaPredicted RBP7.16□□□□□ -1.26
CD44-221ENST00000526000 ZHX3Q9H4I2 956 aa7.16□□□□□ -1.26
CD44-221ENST00000526000 GKN1Q9NS71 199 aa7.16□□□□□ -1.26
CD44-221ENST00000526000 RXFP3Q9NSD7 469 aa7.16□□□□□ -1.26
CD44-221ENST00000526000 CNTN3Q9P232 1028 aa7.16□□□□□ -1.26
CD44-221ENST00000526000 ARHGAP28Q9P2N2 729 aa7.16□□□□□ -1.26
CD44-221ENST00000526000 LIMCH1Q9UPQ0 1083 aa7.16□□□□□ -1.26
CD44-221ENST00000526000 INVSQ9Y283 1065 aa7.16□□□□□ -1.26
CD44-221ENST00000526000 RBM19Q9Y4C8 960 aaKnown RBP7.16□□□□□ -1.26
CD44-221ENST00000526000 MYH15Q9Y2K3 1946 aa7.16□□□□□ -1.26
CD44-221ENST00000526000 VWA8A3KMH1 1905 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 VPS13AQ96RL7 3174 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 MYO15AQ9UKN7 3530 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 MTMR11A4FU01 709 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 K7ESF4 209 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 SLC30A4O14863 429 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 CHADO15335 359 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 MICAL2O94851 1124 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 ADRB1P08588 477 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 CLTAP09496 248 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 PLA2G4BP0C869 781 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 MCM2P49736 904 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 SMTNP53814 917 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 PLD1Q13393 1074 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 PDIA5Q14554 519 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 NOLC1Q14978 699 aaKnown RBP eCLIP7.15□□□□□ -1.26
CD44-221ENST00000526000 TAF12Q16514 161 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 MGAT5BQ3V5L5 792 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 AASDHQ4L235 1098 aaPredicted RBP7.15□□□□□ -1.26
CD44-221ENST00000526000 N4BP2L1Q5TBK1 243 aaPredicted RBP7.15□□□□□ -1.26
CD44-221ENST00000526000 SDHAF4Q5VUM1 108 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 TRIM68Q6AZZ1 485 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 OVOS1Q6IE37 1185 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 DTHD1Q6ZMT9 781 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 KBTBD6Q86V97 674 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 LONP2Q86WA8 852 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 TMC8Q8IU68 726 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 TMEM161BQ8NDZ6 487 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 NETO1Q8TDF5 533 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 BORCS6Q96GS4 357 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 SENP8Q96LD8 212 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 DRC1Q96MC2 740 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 PNMA5Q96PV4 448 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 SLC46A2Q9BY10 475 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 FAM126AQ9BYI3 521 aaPredicted RBP7.15□□□□□ -1.26
CD44-221ENST00000526000 C8orf33Q9H7E9 229 aaPredicted RBP7.15□□□□□ -1.26
CD44-221ENST00000526000 RPF1Q9H9Y2 349 aaKnown RBP7.15□□□□□ -1.26
CD44-221ENST00000526000 PHLPP2Q6ZVD8 1323 aa7.15□□□□□ -1.26
CD44-221ENST00000526000 TTC26A0AVF1 554 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 MYBPHLA2RUH7 354 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 VWA3AA6NCI4 1184 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 M0QZQ0 153 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 ARNTLO00327 626 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 CACNA1AO00555 2505 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 DCLK1O15075 740 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 ZNF292O60281 2723 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 TOM1L1O75674 476 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 OAZ2O95190 189 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 PRAMEF12O95522 483 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 MAPTP10636 758 aaKnown RBP7.14□□□□□ -1.27
CD44-221ENST00000526000 PLS3P13797 630 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 ARSAP15289 507 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 MUTP22033 750 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 NMT1P30419 496 aaKnown RBP7.14□□□□□ -1.27
CD44-221ENST00000526000 CTHP32929 405 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 GPR15P49685 360 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 ACOT2P49753 483 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 LIG4P49917 911 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 EPHA5P54756 1037 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 PPP2R3AQ06190 1150 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 MCL1Q07820 350 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 PSMD2Q13200 908 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 GPR17Q13304 367 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 LRRC32Q14392 662 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 ZBTB6Q15916 424 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 CSRP2Q16527 193 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 SLC39A12Q504Y0 691 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 ARHGAP15Q53QZ3 475 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 ARSHQ5FYA8 562 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 NAIF1Q69YI7 327 aaPredicted RBP7.14□□□□□ -1.27
CD44-221ENST00000526000 IL31Q6EBC2 164 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 JADE1Q6IE81 842 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 HAUS6Q7Z4H7 955 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 LRRTM3Q86VH5 581 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 MYCT1Q8N699 235 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 MAB21L3Q8N8X9 362 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 IGSF22Q8N9C0 903 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 C12orf50Q8NA57 414 aaPredicted RBP7.14□□□□□ -1.27
CD44-221ENST00000526000 OR10T2Q8NGX3 314 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 CDK5RAP3Q96JB5 506 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 NTPCRQ9BSD7 190 aaKnown RBP7.14□□□□□ -1.27
CD44-221ENST00000526000 MKNK1Q9BUB5 465 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 RAB34Q9BZG1 259 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 GPR88Q9GZN0 384 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 IKZF4Q9H2S9 585 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 EBF3Q9H4W6 596 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms