RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 MAPK10P53779 464 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 SLC16A1P53985 500 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 RPS7P62081 194 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 SRSF4Q08170 494 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 ZNF844Q08AG5 666 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 FOXF2Q12947 444 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 TARDBPQ13148 414 aaKnown RBP eCLIP3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 CD300EQ496F6 205 aaPredicted RBP3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 EPHA10Q5JZY3 1008 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 TSTD2Q5T7W7 516 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 UTP14CQ5TAP6 766 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 VWA1Q6PCB0 445 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 PEG10Q86TG7 708 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 SRRM1Q8IYB3 904 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 VPS8Q8N3P4 1428 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 NSUN7Q8NE18 718 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 SLC30A5Q8TAD4 765 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 CHMP4CQ96CF2 233 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 TEKT5Q96M29 485 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 PACSIN1Q9BY11 444 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 SLC29A3Q9BZD2 475 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 INTS13Q9NVM9 706 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 RNF7Q9UBF6 113 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 ARPP21Q9UBL0 812 aaPredicted RBP3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 LUC7L2Q9Y383 392 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 PCDHA13Q9Y5I0 950 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 MROH2BQ7Z745 1585 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 CCDC151A5D8V7 595 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 FZD9O00144 591 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 TOR1BO14657 336 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 MPPED1O15442 326 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 S100BP04271 92 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 CT47B1P0C2W7 299 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 SRGNP10124 158 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 C5AR1P21730 350 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 GATA3P23771 443 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 GRIA3P42263 894 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 PROK1P58294 105 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 KIF23Q02241 960 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 TTF1Q15361 905 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 PLEKHG6Q3KR16 790 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 PABPC1LQ4VXU2 614 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 PAPD7Q5XG87 772 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 ZNF788Q6ZQV5 615 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 AMIGO2Q86SJ2 522 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 MIER2Q8N344 545 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 LPIN2Q92539 896 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 SNX19Q92543 992 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 HOOK2Q96ED9 719 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 KLHL32Q96NJ5 620 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 IMPG2Q9BZV3 1241 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 IP6K2Q9UHH9 426 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 ANKRD6Q9Y2G4 727 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 ENTPD2Q9Y5L3 495 aa3.39□□□□□ -1.87
ECHDC1-218ENST00000525745 DNAJC9-AS1A6NH13 148 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 MANSC4A6NHS7 340 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 ADM5C9JUS6 153 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 IL33O95760 270 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 ERBB2P04626 1255 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 CD1AP06126 327 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 VCAM1P19320 739 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 RAB27AP51159 221 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 KRTAP10-11P60412 298 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 CDC42EP1Q00587 391 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 MC2RQ01718 297 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 DYRK1AQ13627 763 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 NBPF8Q3BBV2 869 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 UAP1L1Q3KQV9 507 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 ODR4Q5SWX8 454 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 KIAA0895LQ68EN5 471 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 GADL1Q6ZQY3 521 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 ADGRG5Q8IZF4 528 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 CPA6Q8N4T0 437 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 SH2D3CQ8N5H7 860 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 B3GALNT2Q8NCR0 500 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 MYCBPAPQ8TBZ2 947 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 IFI44Q8TCB0 444 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 SMG7Q92540 1137 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 HDAC10Q969S8 669 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 COA7Q96BR5 231 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 SARAFQ96BY9 339 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 POLR3GLQ9BT43 218 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 WDR26Q9H7D7 661 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 VSX1Q9NZR4 365 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 JKAMPQ9P055 326 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 CTTNBP2NLQ9P2B4 639 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 TUBD1Q9UJT1 453 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 SLC45A2Q9UMX9 530 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 ST3GAL5Q9UNP4 418 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 NEU2Q9Y3R4 380 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 MAP3K1Q13233 1512 aa3.38□□□□□ -1.87
ECHDC1-218ENST00000525745 CCDC195A0A1B0GUA6 201 aa3.37□□□□□ -1.87
ECHDC1-218ENST00000525745 E2F8A0AVK6 867 aa3.37□□□□□ -1.87
ECHDC1-218ENST00000525745 CCDC154A6NI56 674 aa3.37□□□□□ -1.87
ECHDC1-218ENST00000525745 LINC00473A8K010 186 aa3.37□□□□□ -1.87
ECHDC1-218ENST00000525745 HTRA2O43464 458 aaPredicted RBP3.37□□□□□ -1.87
ECHDC1-218ENST00000525745 PROM1O43490 865 aa3.37□□□□□ -1.87
ECHDC1-218ENST00000525745 SUN1O94901 812 aa3.37□□□□□ -1.87
ECHDC1-218ENST00000525745 RPLP2P05387 115 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-218ENST00000525745 PPP3CBP16298 524 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms