RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 RNF19BQ6ZMZ0 732 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 HFE2Q6ZVN8 426 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 TCEAL8Q8IYN2 117 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 XXYLT1Q8NBI6 393 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 CXorf38Q8TB03 319 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 BORCS6Q96GS4 357 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 ZNF560Q96MR9 790 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 CGNQ9P2M7 1197 aaKnown RBP19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 AFF4Q9UHB7 1163 aaKnown RBP19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 ITGA11Q9UKX5 1188 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 AGAP1Q9UPQ3 857 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 ARIH1Q9Y4X5 557 aaPredicted RBP19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 MYO10Q9HD67 2058 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 KPNA7A9QM74 516 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 CYB561D2O14569 222 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 LRG1P02750 347 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 FSHRP23945 695 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 PNPLA4P41247 253 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 SURF1Q15526 300 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 BMP8AQ7Z5Y6 402 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 C12orf56Q8IXR9 622 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 CSGALNACT2Q8N6G5 542 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 RDH13Q8NBN7 331 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 OR5B17Q8NGF7 314 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 INTS13Q9NVM9 706 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 HCFC1R1Q9NWW0 138 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 DSEQ9UL01 958 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 SORCS3Q9UPU3 1222 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 HCN4Q9Y3Q4 1203 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 INSL5Q9Y5Q6 135 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 DOCK6Q96HP0 2047 aa19.96■□□□□ 0.79
TSPAN4-215ENST00000525334 DOCK8Q8NF50 2099 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 GOLGA6L4A6NEF3 574 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 TMEM221A6NGB7 291 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 M0R296 226 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 SIGLEC14Q08ET2 396 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 MTMR3Q13615 1198 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 MYBPC2Q14324 1141 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 LRRC52Q8N7C0 313 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 OR10T2Q8NGX3 314 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 GOLGA5Q8TBA6 731 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 ANKRD36BP1Q96IX9 119 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 PGLYRP2Q96PD5 576 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 TMEM209Q96SK2 561 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 SMOC2Q9H3U7 446 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.95■□□□□ 0.785e-7■■■■■ 27.4
TSPAN4-215ENST00000525334 EPS15L1Q9UBC2 864 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 DNMT3BQ9UBC3 853 aaKnown RBP19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 SIX4Q9UIU6 781 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 MAFFQ9ULX9 164 aa19.95■□□□□ 0.78
TSPAN4-215ENST00000525334 RHOBTB3O94955 611 aa19.94■□□□□ 0.78
TSPAN4-215ENST00000525334 VNN2O95498 520 aa19.94■□□□□ 0.78
TSPAN4-215ENST00000525334 KRT19P08727 400 aa19.94■□□□□ 0.78
TSPAN4-215ENST00000525334 RBP5P82980 135 aa19.94■□□□□ 0.78
TSPAN4-215ENST00000525334 CYP24A1Q07973 514 aa19.94■□□□□ 0.78
TSPAN4-215ENST00000525334 BFSP1Q12934 665 aa19.94■□□□□ 0.78
TSPAN4-215ENST00000525334 GPR17Q13304 367 aa19.94■□□□□ 0.78
TSPAN4-215ENST00000525334 PSMD6Q15008 389 aa19.94■□□□□ 0.78
TSPAN4-215ENST00000525334 WSCD1Q658N2 575 aa19.94■□□□□ 0.78
TSPAN4-215ENST00000525334 METTL23Q86XA0 190 aa19.94■□□□□ 0.78
TSPAN4-215ENST00000525334 WDR49Q8IV35 697 aa19.94■□□□□ 0.78
TSPAN4-215ENST00000525334 FMR1NBQ8N0W7 255 aaPredicted RBP19.94■□□□□ 0.78
TSPAN4-215ENST00000525334 CCDC47Q96A33 483 aaKnown RBP19.94■□□□□ 0.78
TSPAN4-215ENST00000525334 MFSD14AQ96MC6 490 aa19.94■□□□□ 0.78
TSPAN4-215ENST00000525334 RTP3Q9BQQ7 232 aa19.94■□□□□ 0.78
TSPAN4-215ENST00000525334 KCTD10Q9H3F6 313 aa19.94■□□□□ 0.78
TSPAN4-215ENST00000525334 EXOC3O60645 756 aa19.93■□□□□ 0.78
TSPAN4-215ENST00000525334 TNNC2P02585 160 aa19.93■□□□□ 0.78
TSPAN4-215ENST00000525334 DLATP10515 647 aaKnown RBP19.93■□□□□ 0.78
TSPAN4-215ENST00000525334 LAMP2P13473 410 aa19.93■□□□□ 0.78
TSPAN4-215ENST00000525334 DUOXA2Q1HG44 320 aa19.93■□□□□ 0.78
TSPAN4-215ENST00000525334 PABPC1LQ4VXU2 614 aaKnown RBP19.93■□□□□ 0.78
TSPAN4-215ENST00000525334 UBALD2Q8IYN6 164 aa19.93■□□□□ 0.78
TSPAN4-215ENST00000525334 ITFG1Q8TB96 612 aa19.93■□□□□ 0.78
TSPAN4-215ENST00000525334 PBXIP1Q96AQ6 731 aa19.93■□□□□ 0.78
TSPAN4-215ENST00000525334 CCDC127Q96BQ5 260 aa19.93■□□□□ 0.78
TSPAN4-215ENST00000525334 ASIC4Q96FT7 647 aa19.93■□□□□ 0.78
TSPAN4-215ENST00000525334 CRISPLD1Q9H336 500 aa19.93■□□□□ 0.78
TSPAN4-215ENST00000525334 KCNK12Q9HB15 430 aa19.93■□□□□ 0.78
TSPAN4-215ENST00000525334 NOTCH4Q99466 2003 aa19.93■□□□□ 0.78
TSPAN4-215ENST00000525334 MTMR11A4FU01 709 aa19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 RHOP08100 348 aa19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 TWF1Q12792 350 aa19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 SNW1Q13573 536 aaKnown RBP19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 KCNB1Q14721 858 aa19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 THEM5Q8N1Q8 247 aa19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 ENGASEQ8NFI3 743 aa19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 CCDC34Q96HJ3 373 aa19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 FNBP1Q96RU3 617 aa19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 CGRRF1Q99675 332 aa19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 ZCWPW1Q9H0M4 648 aa19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 GZF1Q9H116 711 aaPredicted RBP19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 IGSF9Q9P2J2 1179 aa19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 CDH7Q9ULB5 785 aa19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 CIZ1Q9ULV3 898 aaPredicted RBP19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 L1RE1Q9UN81 338 aa19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 YIPF1Q9Y548 306 aa19.92■□□□□ 0.78
TSPAN4-215ENST00000525334 PDXKO00764 312 aa19.91■□□□□ 0.78
TSPAN4-215ENST00000525334 PTPN2P17706 415 aa19.91■□□□□ 0.78
TSPAN4-215ENST00000525334 TNNI1P19237 187 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms