RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 CYP3A5P20815 502 aa26.04■■□□□ 1.76
USP47-205ENST00000525257 SOX9P48436 509 aa26.04■■□□□ 1.76
USP47-205ENST00000525257 NCKAP1LP55160 1127 aa26.04■■□□□ 1.76
USP47-205ENST00000525257 GPR17Q13304 367 aa26.04■■□□□ 1.76
USP47-205ENST00000525257 GAS6Q14393 721 aa26.04■■□□□ 1.76
USP47-205ENST00000525257 KIF2CQ99661 725 aa26.04■■□□□ 1.76
USP47-205ENST00000525257 LARSQ9P2J5 1176 aaKnown RBP26.04■■□□□ 1.76
USP47-205ENST00000525257 SLC27A5Q9Y2P5 690 aa26.04■■□□□ 1.76
USP47-205ENST00000525257 PPEF2O14830 753 aa26.03■■□□□ 1.76
USP47-205ENST00000525257 ALDH1A3P47895 512 aa26.03■■□□□ 1.76
USP47-205ENST00000525257 CXCL12P48061 93 aa26.03■■□□□ 1.76
USP47-205ENST00000525257 LIG4P49917 911 aa26.03■■□□□ 1.76
USP47-205ENST00000525257 KPNA1P52294 538 aaPredicted RBP26.03■■□□□ 1.76
USP47-205ENST00000525257 ENOX2Q16206 610 aaKnown RBP26.03■■□□□ 1.76
USP47-205ENST00000525257 RILPL1Q5EBL4 403 aa26.03■■□□□ 1.76
USP47-205ENST00000525257 OVOS1Q6IE37 1185 aa26.03■■□□□ 1.76
USP47-205ENST00000525257 PRR23BQ6ZRT6 265 aa26.03■■□□□ 1.76
USP47-205ENST00000525257 HAUS6Q7Z4H7 955 aa26.03■■□□□ 1.76
USP47-205ENST00000525257 RBM12Q9NTZ6 932 aaKnown RBP26.03■■□□□ 1.76
USP47-205ENST00000525257 KCND2Q9NZV8 630 aa26.03■■□□□ 1.76
USP47-205ENST00000525257 MTMR11A4FU01 709 aa26.02■■□□□ 1.76
USP47-205ENST00000525257 H0YCG3 227 aa26.02■■□□□ 1.76
USP47-205ENST00000525257 HNRNPDLO14979 420 aaKnown RBP26.02■■□□□ 1.76
USP47-205ENST00000525257 CHADO15335 359 aa26.02■■□□□ 1.76
USP47-205ENST00000525257 XPOTO43592 962 aaKnown RBP26.02■■□□□ 1.76
USP47-205ENST00000525257 SOAT2O75908 522 aa26.02■■□□□ 1.76
USP47-205ENST00000525257 SPEM2Q0P670 501 aa26.02■■□□□ 1.76
USP47-205ENST00000525257 TMEM119Q4V9L6 283 aa26.02■■□□□ 1.76
USP47-205ENST00000525257 ARSHQ5FYA8 562 aa26.02■■□□□ 1.76
USP47-205ENST00000525257 LAIR1Q6GTX8 287 aa26.02■■□□□ 1.76
USP47-205ENST00000525257 CENPPQ6IPU0 288 aa26.02■■□□□ 1.76
USP47-205ENST00000525257 KCTD17Q8N5Z5 321 aa26.02■■□□□ 1.76
USP47-205ENST00000525257 TTC9BQ8N6N2 239 aa26.02■■□□□ 1.76
USP47-205ENST00000525257 CELF5Q8N6W0 485 aaKnown RBP26.02■■□□□ 1.76
USP47-205ENST00000525257 ATAD1Q8NBU5 361 aa26.02■■□□□ 1.76
USP47-205ENST00000525257 TMEM209Q96SK2 561 aa26.02■■□□□ 1.76
USP47-205ENST00000525257 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.02■■□□□ 1.76
USP47-205ENST00000525257 TSC2P49815 1807 aa26.02■■□□□ 1.76
USP47-205ENST00000525257 ANK1P16157 1881 aa26.01■■□□□ 1.75
USP47-205ENST00000525257 FCHO2Q0JRZ9 810 aa26.01■■□□□ 1.75
USP47-205ENST00000525257 LRRC32Q14392 662 aa26.01■■□□□ 1.75
USP47-205ENST00000525257 ARID3BQ8IVW6 561 aaPredicted RBP26.01■■□□□ 1.75
USP47-205ENST00000525257 TTC8Q8TAM2 541 aa26.01■■□□□ 1.75
USP47-205ENST00000525257 FAM212AQ96EL1 285 aa26.01■■□□□ 1.75
USP47-205ENST00000525257 MSANTD3Q96H12 275 aa26.01■■□□□ 1.75
USP47-205ENST00000525257 RPF1Q9H9Y2 349 aaKnown RBP26.01■■□□□ 1.75
USP47-205ENST00000525257 EPG5Q9HCE0 2579 aa26.01■■□□□ 1.75
USP47-205ENST00000525257 NUP210Q8TEM1 1887 aaPredicted RBP26■■□□□ 1.75
USP47-205ENST00000525257 DCDC2BA2VCK2 349 aa26■■□□□ 1.75
USP47-205ENST00000525257 OGTO15294 1046 aa26■■□□□ 1.75
USP47-205ENST00000525257 FAM189A1O60320 539 aa26■■□□□ 1.75
USP47-205ENST00000525257 TYMPP19971 482 aa26■■□□□ 1.75
USP47-205ENST00000525257 MLLT6P55198 1093 aaPredicted RBP26■■□□□ 1.75
USP47-205ENST00000525257 DMWDQ09019 674 aa26■■□□□ 1.75
USP47-205ENST00000525257 MYBPC2Q14324 1141 aa26■■□□□ 1.75
USP47-205ENST00000525257 KYAT1Q16773 422 aa26■■□□□ 1.75
USP47-205ENST00000525257 GAREM2Q75VX8 874 aa26■■□□□ 1.75
USP47-205ENST00000525257 SPEM1Q8N4L4 309 aa26■■□□□ 1.75
USP47-205ENST00000525257 ZFYVE19Q96K21 471 aa26■■□□□ 1.75
USP47-205ENST00000525257 REEP2Q9BRK0 252 aa26■■□□□ 1.75
USP47-205ENST00000525257 MKNK1Q9BUB5 465 aa26■■□□□ 1.75
USP47-205ENST00000525257 ATXN3LQ9H3M9 355 aa26■■□□□ 1.75
USP47-205ENST00000525257 C8orf33Q9H7E9 229 aaPredicted RBP26■■□□□ 1.75
USP47-205ENST00000525257 TBX20Q9UMR3 447 aa26■■□□□ 1.75
USP47-205ENST00000525257 CHURC1-FNTBB4DL54 471 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 K7ENM7 598 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 DPYSL4O14531 572 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 ODC1P11926 461 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 FNTBP49356 437 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 LILRA4P59901 499 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 DHX8Q14562 1220 aaKnown RBP25.99■■□□□ 1.75
USP47-205ENST00000525257 WDR44Q5JSH3 913 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 SPATA1Q5VX52 437 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 JADE1Q6IE81 842 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 ARMCX5Q6P1M9 558 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 TXNDC11Q6PKC3 985 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 Q6ZS52 159 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 DNAJB7Q7Z6W7 309 aaPredicted RBP25.99■■□□□ 1.75
USP47-205ENST00000525257 GPBP1Q86WP2 473 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 PSMG2Q969U7 264 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 SENP8Q96LD8 212 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 CNTNAP3BQ96NU0 1288 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 LRRC3BQ96PB8 259 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 RTKNQ9BST9 563 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 CNTNAP3Q9BZ76 1288 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 ODF2LQ9ULJ1 636 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 KIF3AQ9Y496 699 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 ASB3Q9Y575 518 aa25.99■■□□□ 1.75
USP47-205ENST00000525257 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.99■■□□□ 1.75
USP47-205ENST00000525257 TPRP12270 2363 aaKnown RBP25.99■■□□□ 1.75
USP47-205ENST00000525257 SPECC1L-ADORA2AF8WAN1 911 aa25.98■■□□□ 1.75
USP47-205ENST00000525257 GABRR2P28476 465 aa25.98■■□□□ 1.75
USP47-205ENST00000525257 CDR1P51861 262 aa25.98■■□□□ 1.75
USP47-205ENST00000525257 SRSF5Q13243 272 aaKnown RBP25.98■■□□□ 1.75
USP47-205ENST00000525257 SIM2Q14190 667 aaPredicted RBP25.98■■□□□ 1.75
USP47-205ENST00000525257 GPR158Q5T848 1215 aa25.98■■□□□ 1.75
USP47-205ENST00000525257 C1orf228Q6PIY5 440 aa25.98■■□□□ 1.75
USP47-205ENST00000525257 MYCT1Q8N699 235 aa25.98■■□□□ 1.75
USP47-205ENST00000525257 FAM200AQ8TCP9 573 aa25.98■■□□□ 1.75
USP47-205ENST00000525257 MSTO1Q9BUK6 570 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms