RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 HPS3Q969F9 1004 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 MCRS1Q96EZ8 462 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 SENP8Q96LD8 212 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 TMEM209Q96SK2 561 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 LRRC3Q9BY71 257 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 ASB7Q9H672 318 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 MRPL44Q9H9J2 332 aaKnown RBP13.59□□□□□ -0.23
SMCO4-202ENST00000525141 CYP4F11Q9HBI6 524 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 SLC2A4RGQ9NR83 387 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 OLFML3Q9NRN5 406 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 PANK4Q9NVE7 773 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 AFF4Q9UHB7 1163 aaKnown RBP13.59□□□□□ -0.23
SMCO4-202ENST00000525141 SERTAD1Q9UHV2 236 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 ZNF202O95125 648 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 MYL1P05976 194 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 IDEP14735 1019 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 AOC1P19801 751 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 ELF1P32519 619 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 NUBP1P53384 320 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 PTPN5P54829 565 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 POU5F1Q01860 360 aaKnown RBP13.58□□□□□ -0.24
SMCO4-202ENST00000525141 L1TD1Q5T7N2 865 aaKnown RBP13.58□□□□□ -0.24
SMCO4-202ENST00000525141 CLEC17AQ6ZS10 378 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 EFCAB13Q8IY85 973 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 CXorf38Q8TB03 319 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 ING5Q8WYH8 240 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 FAM84AQ96KN4 292 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 ZSWIM3Q96MP5 696 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 PRRX2Q99811 253 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 RTP3Q9BQQ7 232 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 FAM86C1Q9NVL1 165 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 DERAQ9Y315 318 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 INSL5Q9Y5Q6 135 aa13.58□□□□□ -0.24
SMCO4-202ENST00000525141 PVALEFA0A1B0GWK0 134 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 PRRG1O14668 218 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 PRPF6O94906 941 aaKnown RBP13.57□□□□□ -0.24
SMCO4-202ENST00000525141 CEBPBP17676 345 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 TYMPP19971 482 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 AFMP43652 599 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 YWHAHQ04917 246 aaPredicted RBP13.57□□□□□ -0.24
SMCO4-202ENST00000525141 GPR17Q13304 367 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 TANGO2Q6ICL3 276 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 CENPPQ6IPU0 288 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 ZNF280DQ6N043 979 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 DSTYKQ6XUX3 929 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 LRRTM3Q86VH5 581 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 HVCN1Q96D96 273 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 PAGE5Q96GU1 130 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 ACCSQ96QU6 501 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 CORO1BQ9BR76 489 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 GOLPH3LQ9H4A5 285 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 DPP3Q9NY33 737 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 FBXL21Q9UKT6 434 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 CA14Q9ULX7 337 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 MAFFQ9ULX9 164 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 SLC27A5Q9Y2P5 690 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 MRPS23Q9Y3D9 190 aaKnown RBP13.57□□□□□ -0.24
SMCO4-202ENST00000525141 PCDHB13Q9Y5F0 798 aa13.57□□□□□ -0.24
SMCO4-202ENST00000525141 ZFHX2Q9C0A1 2572 aaPredicted RBP13.56□□□□□ -0.24
SMCO4-202ENST00000525141 GOLGA8IPA6NC78 632 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 SHISA7A6NL88 538 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 GOLGA8JA6NMD2 632 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 GCNT3O95395 438 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 CYP11A1P05108 521 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 CDR1P51861 262 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 ASIC1P78348 528 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 TWF1Q12792 350 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 DUSP4Q13115 394 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 ALCAMQ13740 583 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 TMEM132DQ14C87 1099 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 POSTNQ15063 836 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 KRBA2Q6ZNG9 492 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 UNC13DQ70J99 1090 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 FMR1NBQ8N0W7 255 aaPredicted RBP13.56□□□□□ -0.24
SMCO4-202ENST00000525141 ATAD1Q8NBU5 361 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 ENGASEQ8NFI3 743 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 OR10T2Q8NGX3 314 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 POMGNT1Q8WZA1 660 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 SAAL1Q96ER3 474 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 CCDC34Q96HJ3 373 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 PGLYRP2Q96PD5 576 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 KXD1Q9BQD3 176 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 CBWD1Q9BRT8 395 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 FAM213AQ9BRX8 229 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 DNAJC25Q9H1X3 360 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 MFSD1Q9H3U5 465 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 PCIF1Q9H4Z3 704 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 DLGAP2Q9P1A6 1054 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 C2CD2Q9Y426 696 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 COL4A3Q01955 1670 aa13.56□□□□□ -0.24
SMCO4-202ENST00000525141 OR6C75A6NL08 312 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 XPOTO43592 962 aaKnown RBP13.55□□□□□ -0.24
SMCO4-202ENST00000525141 MICAL2O94851 1124 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 LRG1P02750 347 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 GLULP15104 373 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 GJA1P17302 382 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 GARTP22102 1010 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 FCARP24071 287 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 CASP1P29466 404 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 EPHA5P54756 1037 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms