RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 RGMBQ6NW40 437 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 CCDC137Q6PK04 289 aaKnown RBP12.5□□□□□ -0.41
PTPRK-216ENST00000524481 ACOT1Q86TX2 421 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 SYT11Q9BT88 431 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 SAE1Q9UBE0 346 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-216ENST00000524481 INTUQ9ULD6 942 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 NOD1Q9Y239 953 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 M0QYV0 167 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 ATP11AP98196 1134 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 MCL1Q07820 350 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 CEP85LQ5SZL2 805 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 DENND1BQ6P3S1 775 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 MAMDC4Q6UXC1 1216 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 ENOSF1Q7L5Y1 443 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 EXOC8Q8IYI6 725 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 OLIG1Q8TAK6 271 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 TWNKQ96RR1 684 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 ZSWIM1Q9BR11 485 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 GCOM2Q9BZD3 368 aaPredicted RBP12.49□□□□□ -0.41
PTPRK-216ENST00000524481 RNF39Q9H2S5 420 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 PDZD7Q9H5P4 517 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 DPP3Q9NY33 737 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 RNF14Q9UBS8 474 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 MTUS1Q9ULD2 1270 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 HPCAL4Q9UM19 191 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 ADGRA2Q96PE1 1338 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 LRRD1A4D1F6 860 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 DDX3YO15523 660 aaKnown RBP12.49□□□□□ -0.41
PTPRK-216ENST00000524481 ASAP2O43150 1006 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 CAPN2P17655 700 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 PSMC1P62191 440 aaKnown RBP12.49□□□□□ -0.41
PTPRK-216ENST00000524481 TSHZ1Q6ZSZ6 1077 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 CCDC33Q8N5R6 958 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 TMEM35BQ8NCS4 154 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 TTC7AQ9ULT0 858 aaPredicted RBP12.49□□□□□ -0.41
PTPRK-216ENST00000524481 ACO1P21399 889 aaKnown RBP12.49□□□□□ -0.41
PTPRK-216ENST00000524481 ABCD1P33897 745 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 SLCO1A2P46721 670 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 EPHB4P54760 987 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 GRB14Q14449 540 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 IQSEC1Q6DN90 963 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 OR6B2Q6IFH4 312 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 C15orf39Q6ZRI6 1047 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 LRRN4Q8WUT4 740 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 ADAM33Q9BZ11 813 aa12.49□□□□□ -0.41
PTPRK-216ENST00000524481 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.49□□□□□ -0.41
PTPRK-216ENST00000524481 TIMM13Q9Y5L4 95 aaPredicted RBP12.49□□□□□ -0.41
PTPRK-216ENST00000524481 A0A0A6YYK5 440 aaPredicted RBP12.48□□□□□ -0.41
PTPRK-216ENST00000524481 MYADML2A6NDP7 307 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 TUBBP07437 444 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 RALAP11233 206 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 ADORA2BP29275 332 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 TAS2R40P59535 323 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 MFSD10Q14728 455 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 TERF2Q15554 542 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 SAPCD2Q86UD0 394 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 HSPH1Q92598 858 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 NEUROG2Q9H2A3 272 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 TNFSF13BQ9Y275 285 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 STYXL1Q9Y6J8 313 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 TARSL2A2RTX5 802 aaKnown RBP12.48□□□□□ -0.41
PTPRK-216ENST00000524481 GAS2O43903 313 aaKnown RBP12.48□□□□□ -0.41
PTPRK-216ENST00000524481 TSPAN1O60635 241 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 CTNNA1P35221 906 aaKnown RBP12.48□□□□□ -0.41
PTPRK-216ENST00000524481 RABGGTBP53611 331 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 MARCH8Q5T0T0 291 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.48□□□□□ -0.41
PTPRK-216ENST00000524481 HNRNPLLQ8WVV9 542 aaKnown RBP12.48□□□□□ -0.41
PTPRK-216ENST00000524481 TMEM40Q8WWA1 233 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 ZFP42Q96MM3 310 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 GPBP1L1Q9HC44 474 aaPredicted RBP12.48□□□□□ -0.41
PTPRK-216ENST00000524481 ZFYVE28Q9HCC9 887 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 TUBGCP4Q9UGJ1 667 aa12.48□□□□□ -0.41
PTPRK-216ENST00000524481 IGKV6-21A0A0C4DH24 114 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 KIAA0391O15091 583 aaKnown RBP12.47□□□□□ -0.41
PTPRK-216ENST00000524481 ZBTB48P10074 688 aaPredicted RBP12.47□□□□□ -0.41
PTPRK-216ENST00000524481 RARAP10276 462 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 FLT3LGP49771 235 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 NDST1P52848 882 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 ADCY1Q08828 1119 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 ACTRT1Q8TDG2 376 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 ARL8AQ96BM9 186 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 CALN1Q9BXU9 219 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 SIX4Q9UIU6 781 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 PRDM4Q9UKN5 801 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 GABRQQ9UN88 632 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 INPP5FQ9Y2H2 1132 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 STXBP5LQ9Y2K9 1186 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 PAPPA2Q9BXP8 1791 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 GOLGA6CA6NDK9 693 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 AOC2O75106 756 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 ITGBL1O95965 494 aaPredicted RBP12.47□□□□□ -0.41
PTPRK-216ENST00000524481 GOLGA6DP0CG33 693 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 UNGP13051 313 aaPredicted RBP12.47□□□□□ -0.41
PTPRK-216ENST00000524481 PSMA2P25787 234 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 ANXA13P27216 316 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 NOMO3P69849 1222 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 HTRA3P83110 453 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 IFRD2Q12894 506 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms