RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	SLC52A2	Q9HAB3	445 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	ING3	Q9NXR8	418 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	PHTF1	Q9UMS5	762 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	IPP	Q9Y573	584 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	PLEKHH2	Q8IVE3	1493 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	SLIT1	O75093	1534 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	COL16A1	Q07092	1604 aa	Predicted RBP	5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	SLC12A8	A0AV02	714 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	PRSS47	A8MTI9	375 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356		M0R2C6	588 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	RNASEH2A	O75792	299 aa	Known RBP	5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	MT-CO1	P00395	513 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	CT47B1	P0C2W7	299 aa	Predicted RBP	5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	ITGAM	P11215	1152 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	LPO	P22079	712 aa	Predicted RBP	5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	GEMIN4	P57678	1058 aa	Known RBP	5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	SUMO1	P63165	101 aa	Known RBP	5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	NHLH2	Q02577	135 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	OCA2	Q04671	838 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	SCAP	Q12770	1279 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	CHAF1A	Q13111	956 aa	Predicted RBP	5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	STK3	Q13188	491 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	MYBPC2	Q14324	1141 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	L1TD1	Q5T7N2	865 aa	Known RBP	5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	BTNL9	Q6UXG8	535 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	OVCH1	Q7RTY7	1134 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	CNPY4	Q8N129	248 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	USP7	Q93009	1102 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	HERPUD2	Q9BSE4	406 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	EPC1	Q9H2F5	836 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	IFT22	Q9H7X7	185 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	TCF7L1	Q9HCS4	588 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	SAGE1	Q9NXZ1	904 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	C9orf78	Q9NZ63	289 aa	Predicted RBP	5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	APOBEC2	Q9Y235	224 aa	Known RBP	5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	MAP3K2	Q9Y2U5	619 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	MORC2	Q9Y6X9	1032 aa	Predicted RBP	5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	ABCC3	O15438	1527 aa		5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	PRDM15	P57071	1507 aa	Predicted RBP	5.17	□□□□□ -1.58
PCM1-223	ENST00000524356	MSH6	P52701	1360 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	CDK12	Q9NYV4	1490 aa	Predicted RBP	5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	DYTN	A2CJ06	578 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	WIPF3	A6NGB9	483 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	PRRT4	C9JH25	899 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	OPA1	O60313	960 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	HIP1R	O75146	1068 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	TSPY4	P0CV99	314 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	TSPY10	P0CW01	314 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	U2AF1L5	P0DN76	240 aa	Predicted RBP	5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	MCC	P23508	829 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	PPM1F	P49593	454 aa	Predicted RBP	5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	RARRES1	P49788	294 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	U2AF1	Q01081	240 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	POU5F1	Q01860	360 aa	Known RBP	5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	MRPL49	Q13405	166 aa	Known RBP	5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	GPRIN1	Q7Z2K8	1008 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	SKAP1	Q86WV1	359 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	XYLT1	Q86Y38	959 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	GSTCD	Q8NEC7	633 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	SCLY	Q96I15	445 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	CELF4	Q9BZC1	486 aa	Known RBP	5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	RRP7BP	Q9NSQ0	103 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	NDOR1	Q9UHB4	597 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	PNMA8B	Q9ULN7	279 aa	Predicted RBP	5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	PHLPP1	O60346	1717 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	FRMPD2	Q68DX3	1309 aa	Predicted RBP	5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	SYNM	O15061	1565 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	MTUS2	Q5JR59	1369 aa		5.16	□□□□□ -1.58
PCM1-223	ENST00000524356	FGD6	Q6ZV73	1430 aa		5.15	□□□□□ -1.58
PCM1-223	ENST00000524356	CCDC18	Q5T9S5	1454 aa		5.15	□□□□□ -1.58
PCM1-223	ENST00000524356	UBR1	Q8IWV7	1749 aa		5.15	□□□□□ -1.58
PCM1-223	ENST00000524356	PROP1	O75360	226 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	ASL	P04424	464 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	JMJD7	P0C870	316 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	ZBTB48	P10074	688 aa	Predicted RBP	5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	MYBL2	P10244	700 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	CASR	P41180	1078 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	CACNA2D1	P54289	1103 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	ERVK-21	P61565	698 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	IRF9	Q00978	393 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	KRT72	Q14CN4	511 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	INAVA	Q3KP66	663 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	TMEM240	Q5SV17	173 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	GPR158	Q5T848	1215 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	ICE2	Q659A1	982 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	CC2D1A	Q6P1N0	951 aa	Predicted RBP	5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	C1orf228	Q6PIY5	440 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	CPA6	Q8N4T0	437 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	FUBP3	Q96I24	572 aa	Known RBP eCLIP	5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	LRGUK	Q96M69	825 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	IPO9	Q96P70	1041 aa	Known RBP	5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	SELENOO	Q9BVL4	669 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	SLC13A1	Q9BZW2	595 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	KLK15	Q9H2R5	256 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	DDX21	Q9NR30	783 aa	Known RBP eCLIP	5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	KLHL11	Q9NVR0	708 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	MAST1	Q9Y2H9	1570 aa		5.15	□□□□□ -1.59
PCM1-223	ENST00000524356	EP400	Q96L91	3159 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	DIRC3	C9JPN6	131 aa		5.14	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms