RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 APPL2Q8NEU8 664 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 CEP63Q96MT8 703 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 TMEM209Q96SK2 561 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 CDH22Q9UJ99 828 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 POLIQ9UNA4 740 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 R3HCC1Q9Y3T6 440 aaKnown RBP13.8□□□□□ -0.2
VEGFA-224ENST00000523873 SNX9Q9Y5X1 595 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 H7C4K7 107 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 TBC1D4O60343 1298 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 TYMPP19971 482 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 PIK3CAP42336 1068 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 KCNQ1P51787 676 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 YWHAHQ04917 246 aaPredicted RBP13.79□□□□□ -0.2
VEGFA-224ENST00000523873 ZACNQ401N2 412 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 OVOS1Q6IE37 1185 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 SPOPLQ6IQ16 392 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 ZNF280DQ6N043 979 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 ANKRD54Q6NXT1 300 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 PDXDC1Q6P996 788 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 SASS6Q6UVJ0 657 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 C15orf39Q6ZRI6 1047 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 C11orf57Q6ZUT1 292 aaPredicted RBP13.79□□□□□ -0.2
VEGFA-224ENST00000523873 FILIP1Q7Z7B0 1213 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 USP37Q86T82 979 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 OSTM1Q86WC4 334 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 GPR65Q8IYL9 337 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 PDCL2Q8N4E4 241 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 RTP3Q9BQQ7 232 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 PI4K2AQ9BTU6 479 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 MAN1C1Q9NR34 630 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 ARMCX3Q9UH62 379 aaPredicted RBP13.79□□□□□ -0.2
VEGFA-224ENST00000523873 L1RE1Q9UN81 338 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 BACE2Q9Y5Z0 518 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 NOTCH4Q99466 2003 aa13.79□□□□□ -0.2
VEGFA-224ENST00000523873 IKBKBO14920 756 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 NCK2O43639 380 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 OAZ2O95190 189 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 GLUD1P00367 558 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 HLA-DRAP01903 254 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 CYP11A1P05108 521 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 AP3M2P53677 418 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 ROR1Q01973 937 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 CREMQ03060 361 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 MYO1EQ12965 1108 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 NCOA4Q13772 614 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 KLHL40Q2TBA0 621 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 CBWD6Q4V339 395 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 HSP90AA4PQ58FG1 418 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 CBWD3Q5JTY5 395 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 CBWD5Q5RIA9 395 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 SYCE2Q6PIF2 218 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 FOXR2Q6PJQ5 311 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 TMEM184AQ6ZMB5 413 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 PPFIBP1Q86W92 1011 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 CREBRFQ8IUR6 639 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 OR10T2Q8NGX3 314 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.78□□□□□ -0.2
VEGFA-224ENST00000523873 TAS1R2Q8TE23 839 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 CASP10Q92851 521 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 MSLNLQ96KJ4 702 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 XYLT2Q9H1B5 865 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 GDAP2Q9NXN4 497 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 NXF1Q9UBU9 619 aaKnown RBP13.78□□□□□ -0.2
VEGFA-224ENST00000523873 COG5Q9UP83 839 aa13.78□□□□□ -0.2
VEGFA-224ENST00000523873 WDR27A2RRH5 827 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 HUS1O60921 280 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 WEE2P0C1S8 567 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 CPB1P15086 417 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 ACAT1P24752 427 aaKnown RBP13.77□□□□□ -0.21
VEGFA-224ENST00000523873 RAP1GAPP47736 663 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 MCCD1P59942 119 aaPredicted RBP13.77□□□□□ -0.21
VEGFA-224ENST00000523873 RAB33AQ14088 237 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 SOWAHAQ2M3V2 549 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 ZNF699Q32M78 642 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 WDR72Q3MJ13 1102 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 GREB1Q4ZG55 1949 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 RARS2Q5T160 578 aaKnown RBP13.77□□□□□ -0.21
VEGFA-224ENST00000523873 LILRA6Q6PI73 481 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 SCARA5Q6ZMJ2 495 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 FRMD5Q7Z6J6 570 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 METTL23Q86XA0 190 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.77□□□□□ -0.213e-13■■□□□ 13.7
VEGFA-224ENST00000523873 ADGRF2Q8IZF7 708 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 SEMA4DQ92854 862 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 SLC35C1Q96A29 364 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 PGLYRP2Q96PD5 576 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 MMS19Q96T76 1030 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 MRPL45Q9BRJ2 306 aaKnown RBP13.77□□□□□ -0.21
VEGFA-224ENST00000523873 SMYD3Q9H7B4 428 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 TMEM8AQ9HCN3 771 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 DACH1Q9UI36 760 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 CD207Q9UJ71 328 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 NME7Q9Y5B8 376 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 COL6A3P12111 3177 aa13.77□□□□□ -0.21
VEGFA-224ENST00000523873 GRXCR2A6NFK2 248 aa13.76□□□□□ -0.21
VEGFA-224ENST00000523873 RFPL2O75678 378 aa13.76□□□□□ -0.21
VEGFA-224ENST00000523873 VNN2O95498 520 aa13.76□□□□□ -0.21
VEGFA-224ENST00000523873 SRGAP2BP0DMP2 458 aa13.76□□□□□ -0.21
VEGFA-224ENST00000523873 PAX3P23760 479 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms