RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 LRRC3BQ96PB8 259 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 LLPHQ9BRT6 129 aaKnown RBP24.77■■□□□ 1.56
PVT1-218ENST00000523328 MMTAG2Q9BU76 263 aaKnown RBP24.77■■□□□ 1.56
PVT1-218ENST00000523328 OXCT2Q9BYC2 517 aaPredicted RBP24.77■■□□□ 1.56
PVT1-218ENST00000523328 RAB34Q9BZG1 259 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 HAPLN2Q9GZV7 340 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 C2orf42Q9NWW7 574 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 PCDHB6Q9Y5E3 794 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 CNOT1A5YKK6 2376 aaKnown RBP24.77■■□□□ 1.56
PVT1-218ENST00000523328 SPAG17Q6Q759 2223 aa24.76■■□□□ 1.55
PVT1-218ENST00000523328 SDK1Q7Z5N4 2213 aa24.76■■□□□ 1.55
PVT1-218ENST00000523328 TTC26A0AVF1 554 aa24.76■■□□□ 1.55
PVT1-218ENST00000523328 GUCY2CP25092 1073 aa24.76■■□□□ 1.55
PVT1-218ENST00000523328 CTHP32929 405 aa24.76■■□□□ 1.55
PVT1-218ENST00000523328 KPNA1P52294 538 aaPredicted RBP24.76■■□□□ 1.55
PVT1-218ENST00000523328 GPR17Q13304 367 aa24.76■■□□□ 1.55
PVT1-218ENST00000523328 GNL2Q13823 731 aaKnown RBP24.76■■□□□ 1.55
PVT1-218ENST00000523328 ZPBP2Q6X784 338 aa24.76■■□□□ 1.55
PVT1-218ENST00000523328 GPIHBP1Q8IV16 184 aa24.76■■□□□ 1.55
PVT1-218ENST00000523328 TIPINQ9BVW5 301 aa24.76■■□□□ 1.55
PVT1-218ENST00000523328 PLEKHA5Q9HAU0 1116 aa24.76■■□□□ 1.55
PVT1-218ENST00000523328 GREB1Q4ZG55 1949 aa24.76■■□□□ 1.55
PVT1-218ENST00000523328 SPECC1L-ADORA2AF8WAN1 911 aa24.75■■□□□ 1.55
PVT1-218ENST00000523328 GDF9O60383 454 aa24.75■■□□□ 1.55
PVT1-218ENST00000523328 MAPTP10636 758 aaKnown RBP24.75■■□□□ 1.55
PVT1-218ENST00000523328 EPHB3P54753 998 aa24.75■■□□□ 1.55
PVT1-218ENST00000523328 DGKKQ5KSL6 1271 aa24.75■■□□□ 1.55
PVT1-218ENST00000523328 CENPPQ6IPU0 288 aa24.75■■□□□ 1.55
PVT1-218ENST00000523328 GAREM2Q75VX8 874 aa24.75■■□□□ 1.55
PVT1-218ENST00000523328 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.75■■□□□ 1.55
PVT1-218ENST00000523328 RALGPS2Q86X27 583 aaPredicted RBP24.75■■□□□ 1.55
PVT1-218ENST00000523328 LIMCH1Q9UPQ0 1083 aa24.75■■□□□ 1.55
PVT1-218ENST00000523328 TSC2P49815 1807 aa24.75■■□□□ 1.55
PVT1-218ENST00000523328 OR6C75A6NL08 312 aa24.74■■□□□ 1.55
PVT1-218ENST00000523328 CLDN3O15551 220 aa24.74■■□□□ 1.55
PVT1-218ENST00000523328 PLS3P13797 630 aa24.74■■□□□ 1.55
PVT1-218ENST00000523328 CYP3A5P20815 502 aa24.74■■□□□ 1.55
PVT1-218ENST00000523328 U2AF2P26368 475 aaKnown RBP eCLIP24.74■■□□□ 1.552e-7■■□□□ 11.9
PVT1-218ENST00000523328 HOXC13P31276 330 aa24.74■■□□□ 1.55
PVT1-218ENST00000523328 RAD51AP2Q09MP3 1159 aa24.74■■□□□ 1.55
PVT1-218ENST00000523328 HEATR6Q6AI08 1181 aaKnown RBP24.74■■□□□ 1.55
PVT1-218ENST00000523328 KIF12Q96FN5 646 aa24.74■■□□□ 1.55
PVT1-218ENST00000523328 ZFYVE19Q96K21 471 aa24.74■■□□□ 1.55
PVT1-218ENST00000523328 GTSE1Q9NYZ3 720 aa24.74■■□□□ 1.55
PVT1-218ENST00000523328 UBQLN1Q9UMX0 589 aaKnown RBP24.74■■□□□ 1.55
PVT1-218ENST00000523328 SLC27A5Q9Y2P5 690 aa24.74■■□□□ 1.55
PVT1-218ENST00000523328 MTMR11A4FU01 709 aa24.73■■□□□ 1.55
PVT1-218ENST00000523328 CLTAP09496 248 aa24.73■■□□□ 1.55
PVT1-218ENST00000523328 ALDH1A3P47895 512 aa24.73■■□□□ 1.55
PVT1-218ENST00000523328 CCINQ13939 588 aa24.73■■□□□ 1.55
PVT1-218ENST00000523328 USP37Q86T82 979 aa24.73■■□□□ 1.55
PVT1-218ENST00000523328 TTC9BQ8N6N2 239 aa24.73■■□□□ 1.55
PVT1-218ENST00000523328 ATAD1Q8NBU5 361 aa24.73■■□□□ 1.55
PVT1-218ENST00000523328 TTC8Q8TAM2 541 aa24.73■■□□□ 1.55
PVT1-218ENST00000523328 PSMG2Q969U7 264 aa24.73■■□□□ 1.55
PVT1-218ENST00000523328 ASB3Q9Y575 518 aa24.73■■□□□ 1.55
PVT1-218ENST00000523328 LAD1O00515 517 aa24.72■■□□□ 1.55
PVT1-218ENST00000523328 HOXA6P31267 233 aa24.72■■□□□ 1.55
PVT1-218ENST00000523328 PRPHP41219 470 aa24.72■■□□□ 1.55
PVT1-218ENST00000523328 TNFSF9P41273 254 aa24.72■■□□□ 1.55
PVT1-218ENST00000523328 GUCY2FP51841 1108 aa24.72■■□□□ 1.55
PVT1-218ENST00000523328 SMTNP53814 917 aa24.72■■□□□ 1.55
PVT1-218ENST00000523328 HMGN5P82970 282 aaKnown RBP24.72■■□□□ 1.55
PVT1-218ENST00000523328 MYBPC2Q14324 1141 aa24.72■■□□□ 1.55
PVT1-218ENST00000523328 ARHGAP29Q52LW3 1261 aa24.72■■□□□ 1.55
PVT1-218ENST00000523328 DNAJB7Q7Z6W7 309 aaPredicted RBP24.72■■□□□ 1.55
PVT1-218ENST00000523328 FAM160A2Q8N612 972 aaPredicted RBP24.72■■□□□ 1.55
PVT1-218ENST00000523328 OBP2AQ9NY56 170 aa24.72■■□□□ 1.55
PVT1-218ENST00000523328 KCNG1Q9UIX4 513 aa24.72■■□□□ 1.55
PVT1-218ENST00000523328 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.72■■□□□ 1.55
PVT1-218ENST00000523328 USP24Q9UPU5 2620 aa24.72■■□□□ 1.55
PVT1-218ENST00000523328 TYMPP19971 482 aa24.71■■□□□ 1.55
PVT1-218ENST00000523328 PON2Q15165 354 aa24.71■■□□□ 1.55
PVT1-218ENST00000523328 ST3GAL2Q16842 350 aa24.71■■□□□ 1.55
PVT1-218ENST00000523328 OVOS1Q6IE37 1185 aa24.71■■□□□ 1.55
PVT1-218ENST00000523328 DSTYKQ6XUX3 929 aa24.71■■□□□ 1.55
PVT1-218ENST00000523328 TMEM209Q96SK2 561 aa24.71■■□□□ 1.55
PVT1-218ENST00000523328 ATXN3LQ9H3M9 355 aa24.71■■□□□ 1.55
PVT1-218ENST00000523328 ZFHX4Q86UP3 3567 aa24.71■■□□□ 1.55
PVT1-218ENST00000523328 DENND4CQ5VZ89 1909 aa24.71■■□□□ 1.55
PVT1-218ENST00000523328 LACTBL1A8MY62 500 aa24.7■■□□□ 1.54
PVT1-218ENST00000523328 DPYSL4O14531 572 aa24.7■■□□□ 1.54
PVT1-218ENST00000523328 PPEF2O14830 753 aa24.7■■□□□ 1.54
PVT1-218ENST00000523328 FAM189A1O60320 539 aa24.7■■□□□ 1.54
PVT1-218ENST00000523328 FOXD2O60548 495 aaPredicted RBP24.7■■□□□ 1.54
PVT1-218ENST00000523328 SOAT2O75908 522 aa24.7■■□□□ 1.54
PVT1-218ENST00000523328 GABRR2P28476 465 aa24.7■■□□□ 1.54
PVT1-218ENST00000523328 MATR3P43243 847 aaKnown RBP eCLIP24.7■■□□□ 1.544e-7■□□□□ 10.6
PVT1-218ENST00000523328 PPP2R3AQ06190 1150 aa24.7■■□□□ 1.54
PVT1-218ENST00000523328 HYIQ5T013 277 aa24.7■■□□□ 1.54
PVT1-218ENST00000523328 GPR158Q5T848 1215 aa24.7■■□□□ 1.54
PVT1-218ENST00000523328 DTHD1Q6ZMT9 781 aa24.7■■□□□ 1.54
PVT1-218ENST00000523328 WDR5BQ86VZ2 330 aa24.7■■□□□ 1.54
PVT1-218ENST00000523328 SYNPOQ8N3V7 929 aa24.7■■□□□ 1.54
PVT1-218ENST00000523328 SYT2Q8N9I0 419 aaPredicted RBP24.7■■□□□ 1.54
PVT1-218ENST00000523328 FAM200AQ8TCP9 573 aa24.7■■□□□ 1.54
PVT1-218ENST00000523328 PNMA5Q96PV4 448 aa24.7■■□□□ 1.54
PVT1-218ENST00000523328 ATG2BQ96BY7 2078 aa24.7■■□□□ 1.54
PVT1-218ENST00000523328 SCN1AP35498 2009 aa24.69■■□□□ 1.54
PVT1-218ENST00000523328 PRAMEF12O95522 483 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms