RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 RNF19BQ6ZMZ0 732 aa11.78□□□□□ -0.52
PVT1-216ENST00000523068 METTL23Q86XA0 190 aa11.78□□□□□ -0.52
PVT1-216ENST00000523068 TMEM130Q8N3G9 435 aa11.78□□□□□ -0.52
PVT1-216ENST00000523068 GPR152Q8TDT2 470 aa11.78□□□□□ -0.52
PVT1-216ENST00000523068 CACTINQ8WUQ7 758 aaKnown RBP11.78□□□□□ -0.52
PVT1-216ENST00000523068 ING5Q8WYH8 240 aa11.78□□□□□ -0.52
PVT1-216ENST00000523068 ATOH1Q92858 354 aaPredicted RBP11.78□□□□□ -0.52
PVT1-216ENST00000523068 DHX58Q96C10 678 aa11.78□□□□□ -0.52
PVT1-216ENST00000523068 SHDQ96IW2 340 aa11.78□□□□□ -0.52
PVT1-216ENST00000523068 ZNF560Q96MR9 790 aa11.78□□□□□ -0.52
PVT1-216ENST00000523068 PYM1Q9BRP8 204 aaKnown RBP11.78□□□□□ -0.52
PVT1-216ENST00000523068 FAM213AQ9BRX8 229 aa11.78□□□□□ -0.52
PVT1-216ENST00000523068 ASAH2Q9NR71 780 aa11.78□□□□□ -0.52
PVT1-216ENST00000523068 ARHGEF3Q9NR81 526 aa11.78□□□□□ -0.52
PVT1-216ENST00000523068 FAM13BQ9NYF5 915 aa11.78□□□□□ -0.52
PVT1-216ENST00000523068 KRBA1A5PL33 1030 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 PPEF2O14830 753 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 EXTL3O43909 919 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 CYP11A1P05108 521 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 ALDH1A3P47895 512 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 ME1P48163 572 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 EPHB3P54753 998 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 ASIC1P78348 528 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 SLC5A9Q2M3M2 681 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 PRSS36Q5K4E3 855 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 PHLDB3Q6NSJ2 640 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 CNNM4Q6P4Q7 775 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 SHC4Q6S5L8 630 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 BRSK2Q8IWQ3 736 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 THEM5Q8N1Q8 247 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 SAAL1Q96ER3 474 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 MCRS1Q96EZ8 462 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 PGLYRP2Q96PD5 576 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 RPP25Q9BUL9 199 aaKnown RBP11.77□□□□□ -0.53
PVT1-216ENST00000523068 TRIM9Q9C026 710 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 IKZF4Q9H2S9 585 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 RBAKQ9NYW8 714 aaPredicted RBP11.77□□□□□ -0.53
PVT1-216ENST00000523068 HSFX1Q9UBD0 423 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 YIPF1Q9Y548 306 aa11.77□□□□□ -0.53
PVT1-216ENST00000523068 NUP210Q8TEM1 1887 aaPredicted RBP11.76□□□□□ -0.53
PVT1-216ENST00000523068 KPNA7A9QM74 516 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 H0Y858 1186 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 TULP1O00294 542 aaPredicted RBP11.76□□□□□ -0.53
PVT1-216ENST00000523068 CYB561D2O14569 222 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 SPTLC1O15269 473 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 EIF3DO15371 548 aaKnown RBP eCLIP11.76□□□□□ -0.53
PVT1-216ENST00000523068 POLR2DO15514 142 aaKnown RBP11.76□□□□□ -0.53
PVT1-216ENST00000523068 ECI2O75521 394 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 PRPF6O94906 941 aaKnown RBP11.76□□□□□ -0.53
PVT1-216ENST00000523068 OR4Q2P0C623 313 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 CEBPBP17676 345 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 EPHA5P54756 1037 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 GPC5P78333 572 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 TFAMQ00059 246 aaKnown RBP11.76□□□□□ -0.53
PVT1-216ENST00000523068 SMARCB1Q12824 385 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 DUSP4Q13115 394 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 FOXD4L6Q3SYB3 417 aaPredicted RBP11.76□□□□□ -0.53
PVT1-216ENST00000523068 FOXD4L3Q6VB84 417 aaPredicted RBP11.76□□□□□ -0.53
PVT1-216ENST00000523068 EFCAB13Q8IY85 973 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 CCDC105Q8IYK2 499 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 GPD1LQ8N335 351 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 ST13P5Q8NFI4 369 aaPredicted RBP11.76□□□□□ -0.53
PVT1-216ENST00000523068 NOC3LQ8WTT2 800 aaKnown RBP11.76□□□□□ -0.53
PVT1-216ENST00000523068 C2orf15Q8WU43 125 aaKnown RBP11.76□□□□□ -0.53
PVT1-216ENST00000523068 ELSPBP1Q96BH3 223 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 C7orf25Q9BPX7 421 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 KXD1Q9BQD3 176 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 CBWD1Q9BRT8 395 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 GPR88Q9GZN0 384 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 TBC1D17Q9HA65 648 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 KIAA1586Q9HCI6 787 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 CEP72Q9P209 647 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 R3HCC1Q9Y3T6 440 aaKnown RBP11.76□□□□□ -0.53
PVT1-216ENST00000523068 ASB3Q9Y575 518 aa11.76□□□□□ -0.53
PVT1-216ENST00000523068 MTMR11A4FU01 709 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 PI15O43692 258 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 FGF19O95750 216 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 TMEM191BP0C7N4 346 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 MYL4P12829 197 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 TUFMP49411 452 aaKnown RBP11.75□□□□□ -0.53
PVT1-216ENST00000523068 STARD6P59095 220 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 PRKCQQ04759 706 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 SURF1Q15526 300 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 CENPPQ6IPU0 288 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 UNC13DQ70J99 1090 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 ITIH5Q86UX2 942 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 DTWD2Q8NBA8 298 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 TCEAL4Q96EI5 215 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 FGFBP2Q9BYJ0 223 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 ZCWPW1Q9H0M4 648 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 PCIF1Q9H4Z3 704 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 ZFP14Q9HCL3 533 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 ITGA11Q9UKX5 1188 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 PCDHA7Q9UN72 937 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 AGAP1Q9UPQ3 857 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 SIT1Q9Y3P8 196 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 DENND4CQ5VZ89 1909 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 UBE4BO95155 1302 aa11.75□□□□□ -0.53
PVT1-216ENST00000523068 GOLGA8IPA6NC78 632 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 ZNF233A6NK53 670 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms