RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 SLC38A7Q9NVC3 462 aa16.38■□□□□ 0.21
PCM1-218ENST00000523055 CPSF3Q9UKF6 684 aaKnown RBP16.38■□□□□ 0.21
PCM1-218ENST00000523055 NOTCH4Q99466 2003 aa16.38■□□□□ 0.21
PCM1-218ENST00000523055 FGFR3P22607 806 aa16.37■□□□□ 0.21
PCM1-218ENST00000523055 KRT85P78386 507 aa16.37■□□□□ 0.21
PCM1-218ENST00000523055 NTHL1P78549 312 aa16.37■□□□□ 0.21
PCM1-218ENST00000523055 PRKCQQ04759 706 aa16.37■□□□□ 0.21
PCM1-218ENST00000523055 PPP2R3AQ06190 1150 aa16.37■□□□□ 0.21
PCM1-218ENST00000523055 UBXN2BQ14CS0 331 aa16.37■□□□□ 0.21
PCM1-218ENST00000523055 L1TD1Q5T7N2 865 aaKnown RBP16.37■□□□□ 0.21
PCM1-218ENST00000523055 RSPO2Q6UXX9 243 aaPredicted RBP16.37■□□□□ 0.21
PCM1-218ENST00000523055 KIF12Q96FN5 646 aa16.37■□□□□ 0.21
PCM1-218ENST00000523055 DDX27Q96GQ7 796 aaKnown RBP16.37■□□□□ 0.21
PCM1-218ENST00000523055 CLSTN3Q9BQT9 956 aa16.37■□□□□ 0.21
PCM1-218ENST00000523055 RPF1Q9H9Y2 349 aaKnown RBP16.37■□□□□ 0.21
PCM1-218ENST00000523055 GDPD2Q9HCC8 539 aa16.37■□□□□ 0.21
PCM1-218ENST00000523055 PRMT8Q9NR22 394 aaPredicted RBP16.37■□□□□ 0.21
PCM1-218ENST00000523055 FAM13BQ9NYF5 915 aa16.37■□□□□ 0.21
PCM1-218ENST00000523055 FNIP2Q9P278 1114 aa16.37■□□□□ 0.21
PCM1-218ENST00000523055 AGO2Q9UKV8 859 aaKnown RBP16.37■□□□□ 0.21
PCM1-218ENST00000523055 CDH7Q9ULB5 785 aa16.37■□□□□ 0.21
PCM1-218ENST00000523055 KCNH3Q9ULD8 1083 aa16.37■□□□□ 0.21
PCM1-218ENST00000523055 USP18Q9UMW8 372 aa16.37■□□□□ 0.21
PCM1-218ENST00000523055 STYXL1Q9Y6J8 313 aa16.37■□□□□ 0.21
PCM1-218ENST00000523055 A0A1B0GVL5 298 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 PPEF2O14830 753 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 ZMYND10O75800 440 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 NFICP08651 508 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 TDGF1P13385 188 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 PFKFB1P16118 471 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 FSHRP23945 695 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 TARSP26639 723 aaKnown RBP16.36■□□□□ 0.21
PCM1-218ENST00000523055 AFMP43652 599 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 WNT7BP56706 349 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 ELAVL2Q12926 359 aaKnown RBP16.36■□□□□ 0.21
PCM1-218ENST00000523055 BECN1Q14457 450 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 ZBTB6Q15916 424 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 JADE1Q6IE81 842 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 ELMSAN1Q6PJG2 1045 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 CRELD2Q6UXH1 353 aaPredicted RBP16.36■□□□□ 0.21
PCM1-218ENST00000523055 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.36■□□□□ 0.21
PCM1-218ENST00000523055 CCDC65Q8IXS2 484 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 POMGNT1Q8WZA1 660 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 PLEKHA5Q9HAU0 1116 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.36■□□□□ 0.21
PCM1-218ENST00000523055 SERTAD1Q9UHV2 236 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 ZFP37Q9Y6Q3 630 aaPredicted RBP16.36■□□□□ 0.21
PCM1-218ENST00000523055 CEP295Q9C0D2 2601 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 TBC1D4O60343 1298 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 ADRB2P07550 413 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 ABCD1P33897 745 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 CUL4BQ13620 913 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 GRASPQ7Z6J2 395 aaPredicted RBP16.36■□□□□ 0.21
PCM1-218ENST00000523055 FGF13Q92913 245 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 SAAL1Q96ER3 474 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 ACCSQ96QU6 501 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 C7orf25Q9BPX7 421 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 CBWD1Q9BRT8 395 aa16.36■□□□□ 0.21
PCM1-218ENST00000523055 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.36■□□□□ 0.21
PCM1-218ENST00000523055 ZFYVE26Q68DK2 2539 aa16.35■□□□□ 0.21
PCM1-218ENST00000523055 SLC30A4O14863 429 aa16.35■□□□□ 0.21
PCM1-218ENST00000523055 ACTN4O43707 911 aaKnown RBP16.35■□□□□ 0.21
PCM1-218ENST00000523055 RPL9P32969 192 aaKnown RBP16.35■□□□□ 0.21
PCM1-218ENST00000523055 HOXD13P35453 343 aa16.35■□□□□ 0.21
PCM1-218ENST00000523055 MAGEA9P43362 315 aa16.35■□□□□ 0.21
PCM1-218ENST00000523055 KYAT1Q16773 422 aa16.35■□□□□ 0.21
PCM1-218ENST00000523055 PPM1JQ5JR12 505 aa16.35■□□□□ 0.21
PCM1-218ENST00000523055 SLFN12LQ6IEE8 588 aa16.35■□□□□ 0.21
PCM1-218ENST00000523055 GPR65Q8IYL9 337 aa16.35■□□□□ 0.21
PCM1-218ENST00000523055 ZNF687Q8N1G0 1237 aa16.35■□□□□ 0.21
PCM1-218ENST00000523055 SECISBP2LQ93073 1101 aaKnown RBP16.35■□□□□ 0.21
PCM1-218ENST00000523055 FAM84AQ96KN4 292 aa16.35■□□□□ 0.21
PCM1-218ENST00000523055 UBQLN1Q9UMX0 589 aaKnown RBP16.35■□□□□ 0.21
PCM1-218ENST00000523055 NUB1Q9Y5A7 615 aa16.35■□□□□ 0.21
PCM1-218ENST00000523055 PCDHB13Q9Y5F0 798 aa16.35■□□□□ 0.21
PCM1-218ENST00000523055 CDY1Q9Y6F8 540 aa16.35■□□□□ 0.21
PCM1-218ENST00000523055 FASNP49327 2511 aaKnown RBP16.35■□□□□ 0.21
PCM1-218ENST00000523055 GOLGA8IPA6NC78 632 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 GOLGA8JA6NMD2 632 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 LRPAP1P30533 357 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 MCM4P33991 863 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 RPS9P46781 194 aaKnown RBP16.34■□□□□ 0.21
PCM1-218ENST00000523055 AMPD3Q01432 767 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 EHHADHQ08426 723 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 SPEM2Q0P670 501 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 FAM26FQ5R3K3 315 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 CNNM4Q6P4Q7 775 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 POTEHQ6S545 545 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 EFCAB13Q8IY85 973 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 SYCP3Q8IZU3 236 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 ITFG1Q8TB96 612 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 FAM213AQ9BRX8 229 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 LRRC27Q9C0I9 530 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 PCIF1Q9H4Z3 704 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 MAGEF1Q9HAY2 307 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 MTRRQ9UBK8 725 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 FBXW11Q9UKB1 542 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 EXOC7Q9UPT5 735 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 HPSEQ9Y251 543 aa16.34■□□□□ 0.21
PCM1-218ENST00000523055 ZZEF1O43149 2961 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms