RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 AMPD3Q01432 767 aa20.21■□□□□ 0.83
SPIDR-220ENST00000522900 GPR17Q13304 367 aa20.21■□□□□ 0.83
SPIDR-220ENST00000522900 PRSS36Q5K4E3 855 aa20.21■□□□□ 0.83
SPIDR-220ENST00000522900 RESP18Q5W5W9 173 aa20.21■□□□□ 0.83
SPIDR-220ENST00000522900 ATL3Q6DD88 541 aa20.21■□□□□ 0.83
SPIDR-220ENST00000522900 CNNM4Q6P4Q7 775 aa20.21■□□□□ 0.83
SPIDR-220ENST00000522900 BRSK2Q8IWQ3 736 aa20.21■□□□□ 0.83
SPIDR-220ENST00000522900 NOC3LQ8WTT2 800 aaKnown RBP20.21■□□□□ 0.83
SPIDR-220ENST00000522900 RTP3Q9BQQ7 232 aa20.21■□□□□ 0.83
SPIDR-220ENST00000522900 OXCT2Q9BYC2 517 aaPredicted RBP20.21■□□□□ 0.83
SPIDR-220ENST00000522900 BLZF1Q9H2G9 400 aa20.21■□□□□ 0.83
SPIDR-220ENST00000522900 RBAKQ9NYW8 714 aaPredicted RBP20.21■□□□□ 0.83
SPIDR-220ENST00000522900 CFAP45Q9UL16 551 aa20.21■□□□□ 0.83
SPIDR-220ENST00000522900 MAFFQ9ULX9 164 aa20.21■□□□□ 0.83
SPIDR-220ENST00000522900 SLC27A5Q9Y2P5 690 aa20.21■□□□□ 0.83
SPIDR-220ENST00000522900 MYH15Q9Y2K3 1946 aa20.21■□□□□ 0.83
SPIDR-220ENST00000522900 KMT2EQ8IZD2 1858 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.2■□□□□ 0.82
SPIDR-220ENST00000522900 CYB561D2O14569 222 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 EXTL3O43909 919 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 LDHAP00338 332 aaKnown RBP20.2■□□□□ 0.82
SPIDR-220ENST00000522900 CYP11A1P05108 521 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 PAX3P23760 479 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 TAF6P49848 677 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 CLCN5P51795 746 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 TFAMQ00059 246 aaKnown RBP20.2■□□□□ 0.82
SPIDR-220ENST00000522900 DUSP4Q13115 394 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 ARMCX5Q6P1M9 558 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 EPM2AIP1Q7L775 607 aaPredicted RBP20.2■□□□□ 0.82
SPIDR-220ENST00000522900 ALYREFQ86V81 257 aaKnown RBP20.2■□□□□ 0.82
SPIDR-220ENST00000522900 TTC9BQ8N6N2 239 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 ATAD1Q8NBU5 361 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 OR10T2Q8NGX3 314 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 ZNF512Q96ME7 567 aaPredicted RBP20.2■□□□□ 0.82
SPIDR-220ENST00000522900 PRRX2Q99811 253 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 KXD1Q9BQD3 176 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 PYM1Q9BRP8 204 aaKnown RBP20.2■□□□□ 0.82
SPIDR-220ENST00000522900 PLA2G2FQ9BZM2 168 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 PDE11AQ9HCR9 933 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 YIPF1Q9Y548 306 aa20.2■□□□□ 0.82
SPIDR-220ENST00000522900 ZDBF2Q9HCK1 2354 aa20.19■□□□□ 0.82
SPIDR-220ENST00000522900 AFMP43652 599 aa20.19■□□□□ 0.82
SPIDR-220ENST00000522900 PTPN5P54829 565 aa20.19■□□□□ 0.82
SPIDR-220ENST00000522900 MYBPC2Q14324 1141 aa20.19■□□□□ 0.82
SPIDR-220ENST00000522900 WSCD1Q658N2 575 aa20.19■□□□□ 0.82
SPIDR-220ENST00000522900 CENPPQ6IPU0 288 aa20.19■□□□□ 0.82
SPIDR-220ENST00000522900 MTSS1LQ765P7 747 aa20.19■□□□□ 0.82
SPIDR-220ENST00000522900 GRAMD1CQ8IYS0 662 aa20.19■□□□□ 0.82
SPIDR-220ENST00000522900 C1orf127Q8N9H9 656 aa20.19■□□□□ 0.82
SPIDR-220ENST00000522900 SLC2A4RGQ9NR83 387 aa20.19■□□□□ 0.82
SPIDR-220ENST00000522900 FAM13BQ9NYF5 915 aa20.19■□□□□ 0.82
SPIDR-220ENST00000522900 MTMR11A4FU01 709 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 KPNA7A9QM74 516 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 H0Y858 1186 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 STK25O00506 426 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 TGFB1I1O43294 461 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 GALR2O43603 387 aaPredicted RBP20.18■□□□□ 0.82
SPIDR-220ENST00000522900 MOSPD3O75425 235 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 SOAT2O75908 522 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 MYL4P12829 197 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 GJA1P17302 382 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 AOC1P19801 751 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 EHHADHQ08426 723 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 CUL4BQ13620 913 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 FAM26FQ5R3K3 315 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 IQCEQ6IPM2 695 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 NT5DC4Q86YG4 428 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 GPD1LQ8N335 351 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 CXorf38Q8TB03 319 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 ZNF507Q8TCN5 953 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 DNAJC25Q9H1X3 360 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 GDE1Q9NZC3 331 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 SERTAD1Q9UHV2 236 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 AGAP1Q9UPQ3 857 aa20.18■□□□□ 0.82
SPIDR-220ENST00000522900 ZNF197O14709 1029 aa20.17■□□□□ 0.82
SPIDR-220ENST00000522900 ITGB3P05106 788 aa20.17■□□□□ 0.82
SPIDR-220ENST00000522900 POLR2BP30876 1174 aaKnown RBP20.17■□□□□ 0.82
SPIDR-220ENST00000522900 CYP4A22Q5TCH4 519 aa20.17■□□□□ 0.82
SPIDR-220ENST00000522900 LMBRD2Q68DH5 695 aaPredicted RBP20.17■□□□□ 0.82
SPIDR-220ENST00000522900 TANGO2Q6ICL3 276 aa20.17■□□□□ 0.82
SPIDR-220ENST00000522900 STXBP4Q6ZWJ1 553 aa20.17■□□□□ 0.82
SPIDR-220ENST00000522900 UNC13DQ70J99 1090 aa20.17■□□□□ 0.82
SPIDR-220ENST00000522900 PDZD4Q76G19 769 aaPredicted RBP20.17■□□□□ 0.82
SPIDR-220ENST00000522900 LRRTM3Q86VH5 581 aa20.17■□□□□ 0.82
SPIDR-220ENST00000522900 CBWD2Q8IUF1 395 aa20.17■□□□□ 0.82
SPIDR-220ENST00000522900 ELMOD1Q8N336 334 aa20.17■□□□□ 0.82
SPIDR-220ENST00000522900 ZSWIM3Q96MP5 696 aa20.17■□□□□ 0.82
SPIDR-220ENST00000522900 LRRC3Q9BY71 257 aa20.17■□□□□ 0.82
SPIDR-220ENST00000522900 ZCWPW1Q9H0M4 648 aa20.17■□□□□ 0.82
SPIDR-220ENST00000522900 MAGEF1Q9HAY2 307 aa20.17■□□□□ 0.82
SPIDR-220ENST00000522900 FAM86C1Q9NVL1 165 aa20.17■□□□□ 0.82
SPIDR-220ENST00000522900 DSEQ9UL01 958 aa20.17■□□□□ 0.82
SPIDR-220ENST00000522900 ANK1P16157 1881 aa20.17■□□□□ 0.82
SPIDR-220ENST00000522900 EIF3DO15371 548 aaKnown RBP eCLIP20.16■□□□□ 0.82
SPIDR-220ENST00000522900 EPHA5P54756 1037 aa20.16■□□□□ 0.82
SPIDR-220ENST00000522900 SV2CQ496J9 727 aa20.16■□□□□ 0.82
SPIDR-220ENST00000522900 SLC39A12Q504Y0 691 aa20.16■□□□□ 0.82
SPIDR-220ENST00000522900 FAM78AQ5JUQ0 283 aa20.16■□□□□ 0.82
SPIDR-220ENST00000522900 METTL23Q86XA0 190 aa20.16■□□□□ 0.82
SPIDR-220ENST00000522900 NELFCDQ8IXH7 590 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms