RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 MTMR12Q9C0I1 747 aa17.68■□□□□ 0.42
PABPC1-221ENST00000522720 DMAC2Q9NW81 257 aa17.68■□□□□ 0.42
PABPC1-221ENST00000522720 AFF4Q9UHB7 1163 aaKnown RBP17.68■□□□□ 0.42
PABPC1-221ENST00000522720 DSEQ9UL01 958 aa17.68■□□□□ 0.42
PABPC1-221ENST00000522720 MAFFQ9ULX9 164 aa17.68■□□□□ 0.42
PABPC1-221ENST00000522720 DOCK8Q8NF50 2099 aa17.68■□□□□ 0.42
PABPC1-221ENST00000522720 CLUHO75153 1309 aa17.68■□□□□ 0.42
PABPC1-221ENST00000522720 PTPRJQ12913 1337 aa17.68■□□□□ 0.42
PABPC1-221ENST00000522720 EXOC3O60645 756 aa17.67■□□□□ 0.42
PABPC1-221ENST00000522720 XYLBO75191 536 aa17.67■□□□□ 0.42
PABPC1-221ENST00000522720 KIF20AO95235 890 aa17.67■□□□□ 0.42
PABPC1-221ENST00000522720 TMEM191BP0C7N4 346 aa17.67■□□□□ 0.42
PABPC1-221ENST00000522720 CYP24A1Q07973 514 aa17.67■□□□□ 0.42
PABPC1-221ENST00000522720 LMBRD2Q68DH5 695 aaPredicted RBP17.67■□□□□ 0.42
PABPC1-221ENST00000522720 SCARA3Q6AZY7 606 aa17.67■□□□□ 0.42
PABPC1-221ENST00000522720 WDR49Q8IV35 697 aa17.67■□□□□ 0.42
PABPC1-221ENST00000522720 LRRC52Q8N7C0 313 aa17.67■□□□□ 0.42
PABPC1-221ENST00000522720 OR5B17Q8NGF7 314 aa17.67■□□□□ 0.42
PABPC1-221ENST00000522720 ANKRD36BP1Q96IX9 119 aa17.67■□□□□ 0.42
PABPC1-221ENST00000522720 MFSD14AQ96MC6 490 aa17.67■□□□□ 0.42
PABPC1-221ENST00000522720 TIGD1Q96MW7 591 aa17.67■□□□□ 0.42
PABPC1-221ENST00000522720 IPO9Q96P70 1041 aaKnown RBP17.67■□□□□ 0.42
PABPC1-221ENST00000522720 CHMP5Q9NZZ3 219 aa17.67■□□□□ 0.42
PABPC1-221ENST00000522720 SIX4Q9UIU6 781 aa17.67■□□□□ 0.42
PABPC1-221ENST00000522720 PRRG1O14668 218 aa17.66■□□□□ 0.42
PABPC1-221ENST00000522720 CCL16O15467 120 aa17.66■□□□□ 0.42
PABPC1-221ENST00000522720 PRPF40AO75400 957 aaKnown RBP17.66■□□□□ 0.42
PABPC1-221ENST00000522720 SEC24AO95486 1093 aa17.66■□□□□ 0.42
PABPC1-221ENST00000522720 TNNC2P02585 160 aa17.66■□□□□ 0.42
PABPC1-221ENST00000522720 KRT19P08727 400 aa17.66■□□□□ 0.42
PABPC1-221ENST00000522720 CPB1P15086 417 aa17.66■□□□□ 0.42
PABPC1-221ENST00000522720 GPR17Q13304 367 aa17.66■□□□□ 0.42
PABPC1-221ENST00000522720 PNOCQ13519 176 aa17.66■□□□□ 0.42
PABPC1-221ENST00000522720 MYBPC2Q14324 1141 aa17.66■□□□□ 0.42
PABPC1-221ENST00000522720 GRASPQ7Z6J2 395 aaPredicted RBP17.66■□□□□ 0.42
PABPC1-221ENST00000522720 METTL23Q86XA0 190 aa17.66■□□□□ 0.42
PABPC1-221ENST00000522720 FNBP1Q96RU3 617 aa17.66■□□□□ 0.42
PABPC1-221ENST00000522720 CYP4F11Q9HBI6 524 aa17.66■□□□□ 0.42
PABPC1-221ENST00000522720 LIMD1Q9UGP4 676 aa17.66■□□□□ 0.42
PABPC1-221ENST00000522720 NOTCH4Q99466 2003 aa17.65■□□□□ 0.42
PABPC1-221ENST00000522720 NR3C1P04150 777 aa17.65■□□□□ 0.42
PABPC1-221ENST00000522720 DLATP10515 647 aaKnown RBP17.65■□□□□ 0.42
PABPC1-221ENST00000522720 TNNI1P19237 187 aa17.65■□□□□ 0.42
PABPC1-221ENST00000522720 ADCY1Q08828 1119 aa17.65■□□□□ 0.42
PABPC1-221ENST00000522720 WSCD1Q658N2 575 aa17.65■□□□□ 0.42
PABPC1-221ENST00000522720 RNF19BQ6ZMZ0 732 aa17.65■□□□□ 0.42
PABPC1-221ENST00000522720 GUF1Q8N442 669 aaKnown RBP17.65■□□□□ 0.42
PABPC1-221ENST00000522720 EDAQ92838 391 aa17.65■□□□□ 0.42
PABPC1-221ENST00000522720 CCDC127Q96BQ5 260 aa17.65■□□□□ 0.42
PABPC1-221ENST00000522720 CGRRF1Q99675 332 aa17.65■□□□□ 0.42
PABPC1-221ENST00000522720 GZF1Q9H116 711 aaPredicted RBP17.65■□□□□ 0.42
PABPC1-221ENST00000522720 GDAP2Q9NXN4 497 aa17.65■□□□□ 0.42
PABPC1-221ENST00000522720 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.65■□□□□ 0.422e-6■■■□□ 15.6
PABPC1-221ENST00000522720 POLIQ9UNA4 740 aa17.65■□□□□ 0.42
PABPC1-221ENST00000522720 TRAF3IP3Q9Y228 551 aa17.65■□□□□ 0.42
PABPC1-221ENST00000522720 R3HCC1Q9Y3T6 440 aaKnown RBP17.65■□□□□ 0.42
PABPC1-221ENST00000522720 TSC2P49815 1807 aa17.65■□□□□ 0.42
PABPC1-221ENST00000522720 CALUO43852 315 aaPredicted RBP17.64■□□□□ 0.41
PABPC1-221ENST00000522720 GPR37L1O60883 481 aa17.64■□□□□ 0.41
PABPC1-221ENST00000522720 N4BP1O75113 896 aaKnown RBP17.64■□□□□ 0.41
PABPC1-221ENST00000522720 OR4Q2P0C623 313 aa17.64■□□□□ 0.41
PABPC1-221ENST00000522720 BFSP1Q12934 665 aa17.64■□□□□ 0.41
PABPC1-221ENST00000522720 PTPN21Q16825 1174 aa17.64■□□□□ 0.41
PABPC1-221ENST00000522720 TRAPPC11Q7Z392 1133 aa17.64■□□□□ 0.41
PABPC1-221ENST00000522720 ELOA2Q8IYF1 753 aaPredicted RBP17.64■□□□□ 0.41
PABPC1-221ENST00000522720 THEM5Q8N1Q8 247 aa17.64■□□□□ 0.41
PABPC1-221ENST00000522720 OR10T2Q8NGX3 314 aa17.64■□□□□ 0.41
PABPC1-221ENST00000522720 SPATA20Q8TB22 786 aa17.64■□□□□ 0.41
PABPC1-221ENST00000522720 GSDMAQ96QA5 445 aa17.64■□□□□ 0.41
PABPC1-221ENST00000522720 RTP3Q9BQQ7 232 aa17.64■□□□□ 0.41
PABPC1-221ENST00000522720 C11orf16Q9NQ32 467 aa17.64■□□□□ 0.41
PABPC1-221ENST00000522720 RMND1Q9NWS8 449 aa17.64■□□□□ 0.41
PABPC1-221ENST00000522720 HOOK1Q9UJC3 728 aaKnown RBP17.64■□□□□ 0.41
PABPC1-221ENST00000522720 MAPK8IP1Q9UQF2 711 aa17.64■□□□□ 0.41
PABPC1-221ENST00000522720 TECTAO75443 2155 aa17.64■□□□□ 0.41
PABPC1-221ENST00000522720 GADD45BO75293 160 aaPredicted RBP17.63■□□□□ 0.41
PABPC1-221ENST00000522720 SMC2O95347 1197 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 VNN2O95498 520 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 LRG1P02750 347 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 FSHRP23945 695 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 GBP2P32456 591 aaPredicted RBP17.63■□□□□ 0.41
PABPC1-221ENST00000522720 NTHL1P78549 312 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 ZXDAP98168 799 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 MYO1EQ12965 1108 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 NFIL3Q16649 462 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 TMEM31Q5JXX7 168 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 PDCL2Q8N4E4 241 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 PARD3BQ8TEW8 1205 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 ZNF516Q92618 1163 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 HPDLQ96IR7 371 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 PGLYRP2Q96PD5 576 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 MYADMQ96S97 322 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 TMEM209Q96SK2 561 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 ZCWPW1Q9H0M4 648 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 EPS15L1Q9UBC2 864 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 DNMT3BQ9UBC3 853 aaKnown RBP17.63■□□□□ 0.41
PABPC1-221ENST00000522720 PCDHA5Q9Y5H7 936 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 INSL5Q9Y5Q6 135 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 SNX9Q9Y5X1 595 aa17.63■□□□□ 0.41
PABPC1-221ENST00000522720 HUS1O60921 280 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms