RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 AP5S1Q9NUS5 200 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 LPAR3Q9UBY5 353 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 RASAL2Q9UJF2 1139 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 ZNF215Q9UL58 517 aaPredicted RBP4.45□□□□□ -1.7
SKP1-209ENST00000522552 CLCA2Q9UQC9 943 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 MYPNQ86TC9 1320 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 A0A087WZ62 844 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 PRAMEF25A6NGN4 478 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 DGKIO75912 1065 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 TSPAN9O75954 239 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 PCDH8O95206 1070 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 ANXA1P04083 346 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 PRKCBP05771 671 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 MMEP08473 750 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 LAMP2P13473 410 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 IL1R1P14778 569 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 FGFR4P22455 802 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 CYP7A1P22680 504 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 GJA4P35212 333 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 ARL3P36405 182 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 HADHAP40939 763 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 CARSP49589 748 aaKnown RBP4.44□□□□□ -1.7
SKP1-209ENST00000522552 SLC12A2P55011 1212 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 ADCY2Q08462 1091 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 STK4Q13043 487 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 MAMLD1Q13495 774 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 PPP2R5BQ15173 497 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 GLIPR1L2Q4G1C9 344 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 SETMARQ53H47 684 aaPredicted RBP4.44□□□□□ -1.7
SKP1-209ENST00000522552 CC2D1BQ5T0F9 858 aaKnown RBP4.44□□□□□ -1.7
SKP1-209ENST00000522552 FYB2Q5VWT5 728 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 ARL6IP4Q66PJ3 421 aaKnown RBP4.44□□□□□ -1.7
SKP1-209ENST00000522552 H1FNTQ75WM6 255 aaPredicted RBP4.44□□□□□ -1.7
SKP1-209ENST00000522552 KANSL1Q7Z3B3 1105 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 NLRP14Q86W24 1093 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 SLC44A2Q8IWA5 706 aaPredicted RBP4.44□□□□□ -1.7
SKP1-209ENST00000522552 RBM12BQ8IXT5 1001 aaKnown RBP4.44□□□□□ -1.7
SKP1-209ENST00000522552 SAMD14Q8IZD0 417 aaPredicted RBP4.44□□□□□ -1.7
SKP1-209ENST00000522552 ADSSL1Q8N142 457 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 ZNF619Q8N2I2 560 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 TTC39CQ8N584 583 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 TMEM57Q8N5G2 664 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 OR6B3Q8NGW1 331 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 OR6Y1Q8NGX8 325 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 BRIX1Q8TDN6 353 aaKnown RBP4.44□□□□□ -1.7
SKP1-209ENST00000522552 ZNF384Q8TF68 577 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 ASB15Q8WXK1 588 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 SDCCAG3Q96C92 435 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 TSGA13Q96PP4 275 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 PIGSQ96S52 555 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 REEP2Q9BRK0 252 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 FDXACB1Q9BRP7 624 aaPredicted RBP4.44□□□□□ -1.7
SKP1-209ENST00000522552 RTKNQ9BST9 563 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 PLVAPQ9BX97 442 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 DPH1Q9BZG8 443 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 SUGCTQ9HAC7 445 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 SMURF2Q9HAU4 748 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 BRF2Q9HAW0 419 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 EPB41L4AQ9HCS5 686 aaPredicted RBP4.44□□□□□ -1.7
SKP1-209ENST00000522552 SLC6A20Q9NP91 592 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 TDP1Q9NUW8 608 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 TBC1D23Q9NUY8 699 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 RIC8BQ9NVN3 520 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 PI4KBQ9UBF8 816 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 USP18Q9UMW8 372 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 MTO1Q9Y2Z2 717 aaKnown RBP4.44□□□□□ -1.7
SKP1-209ENST00000522552 RRP15Q9Y3B9 282 aaKnown RBP4.44□□□□□ -1.7
SKP1-209ENST00000522552 ATP6V0A2Q9Y487 856 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 USP15Q9Y4E8 981 aaPredicted RBP4.44□□□□□ -1.7
SKP1-209ENST00000522552 TELO2Q9Y4R8 837 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 PSAT1Q9Y617 370 aa4.44□□□□□ -1.7
SKP1-209ENST00000522552 CCDC78A2IDD5 438 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 FAM171A2A8MVW0 826 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 NPHS1O60500 1241 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 LILRB5O75023 590 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 USP1O94782 785 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 PLATP00750 562 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 PRLP01236 227 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 P4HA1P13674 534 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 NPPBP16860 134 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 SYN1P17600 705 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 HDCP19113 662 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 PPP5CP53041 499 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 SESN2P58004 480 aaPredicted RBP4.43□□□□□ -1.7
SKP1-209ENST00000522552 RBP5P82980 135 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 FSTL1Q12841 308 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 TARDBPQ13148 414 aaKnown RBP eCLIP4.43□□□□□ -1.7
SKP1-209ENST00000522552 SLC13A2Q13183 592 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 SNAPC2Q13487 334 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 BAK1Q16611 211 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 DUOXA2Q1HG44 320 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 DUSP28Q4G0W2 176 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 ODF2Q5BJF6 829 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 METTL24Q5JXM2 366 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 MFSD5Q6N075 450 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 ABRAXAS1Q6UWZ7 409 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 GAREM2Q75VX8 874 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 RRAGAQ7L523 313 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 ANKS1BQ7Z6G8 1248 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 SLFN11Q7Z7L1 901 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms