RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CHGBP05060 677 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 PYGLP06737 847 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 IL1R1P14778 569 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 SREBF1P36956 1147 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 CCDC144BQ3MJ40 725 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 RRM2BQ7LG56 351 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 TMEM117Q9H0C3 514 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 ENTPD7Q9NQZ7 604 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 NDE1Q9NXR1 346 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 ZFP69BQ9UJL9 534 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 DSEQ9UL01 958 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 TADA3O75528 432 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 HAUS5O94927 633 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 TGFB3P10600 412 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 GTF2H1P32780 548 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 OLFML3Q9NRN5 406 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 ARHGEF38Q9NXL2 777 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 GRAP2O75791 330 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 CLCN3P51790 818 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 HERVK_113P62684 666 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 FOXD4Q12950 439 aaPredicted RBP17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 METTL7BQ6UX53 244 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 PTPRN2Q92932 1015 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 NSMCE4AQ9NXX6 385 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 PAK5Q9P286 719 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 ITIH6Q6UXX5 1313 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 PPRC1Q5VV67 1664 aaKnown RBP17.02■□□□□ 0.32
PCDHA3-201ENST00000522353 AARSP49588 968 aaKnown RBP eCLIP17.02■□□□□ 0.32
PCDHA3-201ENST00000522353 BOLA3Q53S33 107 aa17.02■□□□□ 0.32
PCDHA3-201ENST00000522353 MPZL3Q6UWV2 235 aa17.02■□□□□ 0.32
PCDHA3-201ENST00000522353 C4orf22Q6V702 233 aa17.02■□□□□ 0.32
PCDHA3-201ENST00000522353 CEP170BQ9Y4F5 1589 aaPredicted RBP17.02■□□□□ 0.32
PCDHA3-201ENST00000522353 KLRC1P26715 233 aa17.02■□□□□ 0.32
PCDHA3-201ENST00000522353 GPR63Q9BZJ6 419 aa17.02■□□□□ 0.32
PCDHA3-201ENST00000522353 KLK14Q9P0G3 267 aa17.02■□□□□ 0.32
PCDHA3-201ENST00000522353 FHOD1Q9Y613 1164 aa17.02■□□□□ 0.32
PCDHA3-201ENST00000522353 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.02■□□□□ 0.31
PCDHA3-201ENST00000522353 HNRNPCL2B2RXH8 293 aa17.02■□□□□ 0.31
PCDHA3-201ENST00000522353 HNRNPCL1O60812 293 aaKnown RBP17.02■□□□□ 0.31
PCDHA3-201ENST00000522353 GGCXP38435 758 aa17.02■□□□□ 0.31
PCDHA3-201ENST00000522353 ZNF177Q13360 481 aaPredicted RBP17.02■□□□□ 0.31
PCDHA3-201ENST00000522353 NCAPHQ15003 741 aa17.02■□□□□ 0.31
PCDHA3-201ENST00000522353 SOCS4Q8WXH5 440 aa17.02■□□□□ 0.31
PCDHA3-201ENST00000522353 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.02■□□□□ 0.31
PCDHA3-201ENST00000522353 KIAA1683Q9H0B3 1180 aa17.02■□□□□ 0.31
PCDHA3-201ENST00000522353 KLHL11Q9NVR0 708 aa17.02■□□□□ 0.31
PCDHA3-201ENST00000522353 ATP11BQ9Y2G3 1177 aa17.02■□□□□ 0.31
PCDHA3-201ENST00000522353 PDHXO00330 501 aa17.02■□□□□ 0.31
PCDHA3-201ENST00000522353 NAB2Q15742 525 aa17.02■□□□□ 0.31
PCDHA3-201ENST00000522353 RRAGCQ9HB90 399 aa17.02■□□□□ 0.31
PCDHA3-201ENST00000522353 TARSL2A2RTX5 802 aaKnown RBP17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 ATN1P54259 1190 aaPredicted RBP17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 ACBD5Q5T8D3 534 aaPredicted RBP17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 UBA3Q8TBC4 463 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 KIFC3Q9BVG8 833 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 AGPAT3Q9NRZ7 376 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 TEKT2Q9UIF3 430 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 ADAM21Q9UKJ8 722 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 PCNX4Q63HM2 1172 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 ARMC6Q6NXE6 501 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 INTUQ9ULD6 942 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 ZDHHC9Q9Y397 364 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 H0Y626 953 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 ARFIP2P53365 341 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 VCPP55072 806 aaKnown RBP17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 DPF2Q92785 391 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 SRPK1Q96SB4 655 aaKnown RBP17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 FOXP3Q9BZS1 431 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 SENP2Q9HC62 589 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 ZC3H7BQ9UGR2 993 aaKnown RBP17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 ESYT3A0FGR9 886 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 GMNCA6NCL1 334 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 CHUKO15111 745 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 CKMP06732 381 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 SERPINB9P50453 376 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 AMPD2Q01433 879 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 KIZQ2M2Z5 673 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 PTRHD1Q6GMV3 140 aaKnown RBP17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 CDR2LQ86X02 465 aaPredicted RBP17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 PIP4K2CQ8TBX8 421 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 CLMNQ96JQ2 1002 aa17.01■□□□□ 0.31
PCDHA3-201ENST00000522353 H3BRB1 525 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 ZNF263O14978 683 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 AP1G2O75843 785 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 F9P00740 461 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 THP07101 528 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 KITP10721 976 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 YY1P25490 414 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 GLRA4Q5JXX5 417 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 SPATA16Q9BXB7 569 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 TUT1Q9H6E5 874 aaKnown RBP17■□□□□ 0.31
PCDHA3-201ENST00000522353 NOP53Q9NZM5 478 aaKnown RBP17■□□□□ 0.31
PCDHA3-201ENST00000522353 AMACRQ9UHK6 382 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 PCDHB12Q9Y5F1 795 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 CCDC195A0A1B0GUA6 201 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 RAG1P15918 1043 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 SLC9A1P19634 815 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 ACO1P21399 889 aaKnown RBP17■□□□□ 0.31
PCDHA3-201ENST00000522353 GARTP22102 1010 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 NFE2Q16621 373 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms