RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 EPHA5P54756 1037 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 ROR1Q01973 937 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 ATAT1Q5SQI0 421 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 PRSS55Q6UWB4 352 aaPredicted RBP10.19□□□□□ -0.78
CLK4-209ENST00000521621 DSTYKQ6XUX3 929 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 THEM5Q8N1Q8 247 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 PLCD3Q8N3E9 789 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 NXPE3Q969Y0 559 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 SYAP1Q96A49 352 aaPredicted RBP10.19□□□□□ -0.78
CLK4-209ENST00000521621 FNBP1Q96RU3 617 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 PKMYT1Q99640 499 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 WDR6Q9NNW5 1121 aaKnown RBP10.19□□□□□ -0.78
CLK4-209ENST00000521621 TSHZ2Q9NRE2 1034 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 KIAA1468Q9P260 1216 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 ASB3Q9Y575 518 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 BICDL2A1A5D9 508 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 LRRIQ3A6PVS8 624 aaPredicted RBP10.19□□□□□ -0.78
CLK4-209ENST00000521621 PPP1R3GB7ZBB8 358 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 FGF19O95750 216 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 FKBP3Q00688 224 aaKnown RBP10.19□□□□□ -0.78
CLK4-209ENST00000521621 ZACNQ401N2 412 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 CTXN3Q4LDR2 81 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 OVOS1Q6IE37 1185 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 RSPO2Q6UXX9 243 aaPredicted RBP10.19□□□□□ -0.78
CLK4-209ENST00000521621 FILIP1Q7Z7B0 1213 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 UHRF1Q96T88 793 aaPredicted RBP10.19□□□□□ -0.78
CLK4-209ENST00000521621 COL25A1Q9BXS0 654 aaPredicted RBP10.19□□□□□ -0.78
CLK4-209ENST00000521621 EPS15L1Q9UBC2 864 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 CACNG4Q9UBN1 327 aa10.19□□□□□ -0.78
CLK4-209ENST00000521621 GOLGA8IPA6NC78 632 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 GOLGA8JA6NMD2 632 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 TNFRSF10AO00220 468 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 CYB561D2O14569 222 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 PSMA7O14818 248 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 CLIC2O15247 247 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 GNA14O95837 355 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 ITGB3P05106 788 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 IGFBP6P24592 240 aaPredicted RBP10.18□□□□□ -0.78
CLK4-209ENST00000521621 POLR2BP30876 1174 aaKnown RBP10.18□□□□□ -0.78
CLK4-209ENST00000521621 TFAMQ00059 246 aaKnown RBP10.18□□□□□ -0.78
CLK4-209ENST00000521621 C1orf220Q5T0J3 134 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 FRMD5Q7Z6J6 570 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 OR5B17Q8NGF7 314 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 ZNF516Q92618 1163 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 RTP3Q9BQQ7 232 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 XYLT2Q9H1B5 865 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 METTL14Q9HCE5 456 aaKnown RBP10.18□□□□□ -0.78
CLK4-209ENST00000521621 AGAP1Q9UPQ3 857 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 CDY1Q9Y6F8 540 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 WDR27A2RRH5 827 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 H3BQ06 376 aaPredicted RBP10.18□□□□□ -0.78
CLK4-209ENST00000521621 PPEF2O14830 753 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 CETN3O15182 167 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 XYLBO75191 536 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 IL9P15248 144 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 NR2F2P24468 414 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 OR1D2P34982 312 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 CYP2J2P51589 502 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 SPAG1Q07617 926 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 DCP1BQ8IZD4 617 aaKnown RBP10.18□□□□□ -0.78
CLK4-209ENST00000521621 TTC39CQ8N584 583 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 CSGALNACT2Q8N6G5 542 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 PLEKHO2Q8TD55 490 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 HASPINQ8TF76 798 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 MTMR12Q9C0I1 747 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 ZMYM5Q9UJ78 669 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 COQ4Q9Y3A0 265 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 SZT2Q5T011 3432 aa10.18□□□□□ -0.78
CLK4-209ENST00000521621 SCN1AP35498 2009 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 CLUHO75153 1309 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 PI4K2BG5E9Z4 385 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 P4HA2O15460 535 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 VAMP7P51809 220 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 BFSP1Q12934 665 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 ADAM9Q13443 819 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 SGSM1Q2NKQ1 1148 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 LIN9Q5TKA1 542 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 FAM171BQ6P995 826 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 CEP57Q86XR8 500 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 MLKLQ8NB16 471 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 SPPL2BQ8TCT7 592 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 RABGGTAQ92696 567 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 FAM212AQ96EL1 285 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 FUBP3Q96I24 572 aaKnown RBP eCLIP10.17□□□□□ -0.78
CLK4-209ENST00000521621 HPDLQ96IR7 371 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 B3GALT6Q96L58 329 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 ADAM12O43184 909 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 HUS1O60921 280 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 AKAP3O75969 853 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 BMP6P22004 513 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 MAGEA11P43364 429 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 MAPRE1Q15691 268 aaKnown RBP10.17□□□□□ -0.78
CLK4-209ENST00000521621 NFE2Q16621 373 aaPredicted RBP10.17□□□□□ -0.78
CLK4-209ENST00000521621 TTI2Q6NXR4 508 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 LLGL2Q6P1M3 1020 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 OTOP3Q7RTS5 596 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 FAM186BQ8IYM0 893 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 PDCL2Q8N4E4 241 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 TMEM8AQ9HCN3 771 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms