RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 NOMO2Q5JPE7 1267 aa8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 METRNLQ641Q3 311 aa8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 TOGARAM2Q6ZUX3 1019 aa8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 USP37Q86T82 979 aa8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 DPP9Q86TI2 863 aa8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 DVL3Q92997 716 aaPredicted RBP8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 NMD3Q96D46 503 aaKnown RBP8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 MSLNLQ96KJ4 702 aa8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 CCDC138Q96M89 665 aa8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 WWC2-AS2Q96NR7 200 aa8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 GPR20Q99678 358 aa8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 KRTAP9-3Q9BYQ3 159 aa8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 KRTAP3-1Q9BYR8 98 aa8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 IMPG2Q9BZV3 1241 aa8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 UNKQ9C0B0 810 aaKnown RBP8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 SIK2Q9H0K1 926 aa8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 CD248Q9HCU0 757 aa8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 SACM1LQ9NTJ5 587 aa8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 AFF4Q9UHB7 1163 aaKnown RBP8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 JAG2Q9Y219 1238 aa8.08□□□□□ -1.12
NUDCD1-204ENST00000521439 RASA4BC9J798 803 aa8.07□□□□□ -1.12
NUDCD1-204ENST00000521439 LEFTY2O00292 366 aa8.07□□□□□ -1.12
NUDCD1-204ENST00000521439 RASA4O43374 803 aa8.07□□□□□ -1.12
NUDCD1-204ENST00000521439 SERPINB3P29508 390 aa8.07□□□□□ -1.12
NUDCD1-204ENST00000521439 MXRA7P84157 204 aa8.07□□□□□ -1.12
NUDCD1-204ENST00000521439 SLC13A2Q13183 592 aa8.07□□□□□ -1.12
NUDCD1-204ENST00000521439 FAM102AQ5T9C2 384 aaPredicted RBP8.07□□□□□ -1.12
NUDCD1-204ENST00000521439 DBX2Q6ZNG2 339 aa8.07□□□□□ -1.12
NUDCD1-204ENST00000521439 RHOT2Q8IXI1 618 aa8.07□□□□□ -1.12
NUDCD1-204ENST00000521439 PSMD1Q99460 953 aa8.07□□□□□ -1.12
NUDCD1-204ENST00000521439 TINAGL1Q9GZM7 467 aaPredicted RBP8.07□□□□□ -1.12
NUDCD1-204ENST00000521439 SMURF2Q9HAU4 748 aa8.07□□□□□ -1.12
NUDCD1-204ENST00000521439 PNPLA8Q9NP80 782 aa8.07□□□□□ -1.12
NUDCD1-204ENST00000521439 AGAP1Q9UPQ3 857 aa8.07□□□□□ -1.12
NUDCD1-204ENST00000521439 PLEKHM1Q9Y4G2 1056 aa8.07□□□□□ -1.12
NUDCD1-204ENST00000521439 XDHP47989 1333 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 ARID4BQ4LE39 1312 aaPredicted RBP8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 E9PLN8 166 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 TPD52L2O43399 206 aaKnown RBP8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 DNAJB5O75953 348 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 UNC5CO95185 931 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 LDHAP00338 332 aaKnown RBP8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 ZNF20P17024 532 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 SCNN1GP51170 649 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 SLFN5Q08AF3 891 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 ZNF543Q08ER8 600 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 AGAP9Q5VTM2 703 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 TSHZ3Q63HK5 1081 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 SPICE1Q8N0Z3 855 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 PDPRQ8NCN5 879 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 ACRBPQ8NEB7 543 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 MAML1Q92585 1016 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 NEU1Q99519 415 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 VKORC1Q9BQB6 163 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 DEF6Q9H4E7 631 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 COL20A1Q9P218 1284 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 FNIP2Q9P278 1114 aa8.06□□□□□ -1.12
NUDCD1-204ENST00000521439 TRIM43BA6NCK2 446 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 DIRC3C9JPN6 131 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 IL18RAPO95256 599 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 FCER1AP12319 257 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 APOBEC3AP31941 199 aaPredicted RBP8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 POU6F2P78424 691 aaPredicted RBP8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 CTBP1Q13363 440 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 RAB32Q13637 225 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 CNGB1Q14028 1251 aaPredicted RBP8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 DAG1Q14118 895 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 C3orf38Q5JPI3 329 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 LMBRD2Q68DH5 695 aaPredicted RBP8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 TRIM43Q96BQ3 446 aaPredicted RBP8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 MARS2Q96GW9 593 aaKnown RBP8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 SGCZQ96LD1 299 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 RIPOR3Q96MK2 946 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 DCLRE1CQ96SD1 692 aaKnown RBP8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 ADOQ96SZ5 270 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 CDK5RAP1Q96SZ6 601 aaKnown RBP8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 TLR10Q9BXR5 811 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 ZNF518BQ9C0D4 1074 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 STARD7Q9NQZ5 370 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 TAGLN3Q9UI15 199 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 TCAF1Q9Y4C2 921 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 DAAM1Q9Y4D1 1078 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 PAXBP1Q9Y5B6 917 aa8.05□□□□□ -1.12
NUDCD1-204ENST00000521439 A0A0U1RQG5 324 aaPredicted RBP8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 KRTAP23-1A1A580 65 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 POM121BA6NF01 834 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 F8W8V4 182 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 M0QYG6 137 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 GRPP07492 148 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 STT3AP46977 705 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 SELENOPP49908 381 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 PTTG1IPP53801 180 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 TCF15Q12870 199 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 CRHR2Q13324 411 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 RRP1BQ14684 758 aaKnown RBP8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 AMOTQ4VCS5 1084 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 SLC44A4Q53GD3 710 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 OR2C3Q8N628 320 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 ZC3H10Q96K80 434 aaKnown RBP8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 PNKPQ96T60 521 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms