RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 PGLYRP2Q96PD5 576 aa23.29■■□□□ 1.32
HOXA3-204ENST00000521401 RTP3Q9BQQ7 232 aa23.29■■□□□ 1.32
HOXA3-204ENST00000521401 CEP72Q9P209 647 aa23.29■■□□□ 1.32
HOXA3-204ENST00000521401 SERTAD1Q9UHV2 236 aa23.29■■□□□ 1.32
HOXA3-204ENST00000521401 MRPS23Q9Y3D9 190 aaKnown RBP23.29■■□□□ 1.32
HOXA3-204ENST00000521401 TGFB1I1O43294 461 aa23.28■■□□□ 1.32
HOXA3-204ENST00000521401 ACTN4O43707 911 aaKnown RBP23.28■■□□□ 1.32
HOXA3-204ENST00000521401 NPR3P17342 541 aa23.28■■□□□ 1.32
HOXA3-204ENST00000521401 AFMP43652 599 aa23.28■■□□□ 1.32
HOXA3-204ENST00000521401 TFAMQ00059 246 aaKnown RBP23.28■■□□□ 1.32
HOXA3-204ENST00000521401 TWF1Q12792 350 aa23.28■■□□□ 1.32
HOXA3-204ENST00000521401 PRSS36Q5K4E3 855 aa23.28■■□□□ 1.32
HOXA3-204ENST00000521401 GRAMD1CQ8IYS0 662 aa23.28■■□□□ 1.32
HOXA3-204ENST00000521401 PDE11AQ9HCR9 933 aa23.28■■□□□ 1.32
HOXA3-204ENST00000521401 NOTCH4Q99466 2003 aa23.28■■□□□ 1.32
HOXA3-204ENST00000521401 PVALEFA0A1B0GWK0 134 aa23.27■■□□□ 1.32
HOXA3-204ENST00000521401 CYB561D2O14569 222 aa23.27■■□□□ 1.32
HOXA3-204ENST00000521401 KIAA0391O15091 583 aaKnown RBP23.27■■□□□ 1.32
HOXA3-204ENST00000521401 SLFN14P0C7P3 912 aa23.27■■□□□ 1.32
HOXA3-204ENST00000521401 SRFP11831 508 aa23.27■■□□□ 1.32
HOXA3-204ENST00000521401 CMA1P23946 247 aa23.27■■□□□ 1.32
HOXA3-204ENST00000521401 CCR2P41597 374 aa23.27■■□□□ 1.32
HOXA3-204ENST00000521401 CWF19L1Q69YN2 538 aaKnown RBP23.27■■□□□ 1.32
HOXA3-204ENST00000521401 ING5Q8WYH8 240 aa23.27■■□□□ 1.32
HOXA3-204ENST00000521401 CORO1BQ9BR76 489 aa23.27■■□□□ 1.32
HOXA3-204ENST00000521401 PYM1Q9BRP8 204 aaKnown RBP23.27■■□□□ 1.32
HOXA3-204ENST00000521401 WNT16Q9UBV4 365 aa23.27■■□□□ 1.32
HOXA3-204ENST00000521401 HPSEQ9Y251 543 aa23.27■■□□□ 1.32
HOXA3-204ENST00000521401 YIPF1Q9Y548 306 aa23.27■■□□□ 1.32
HOXA3-204ENST00000521401 ANK1P16157 1881 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 A0A1B0GVL5 298 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 MTMR11A4FU01 709 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 KLRC4O43908 158 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 CFHP08603 1231 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 PFKFB1P16118 471 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 CEBPBP17676 345 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 POLR2BP30876 1174 aaKnown RBP23.26■■□□□ 1.31
HOXA3-204ENST00000521401 KRT85P78386 507 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 DUSP4Q13115 394 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 WSCD1Q658N2 575 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 CENPPQ6IPU0 288 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 CBWD2Q8IUF1 395 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 HS6ST3Q8IZP7 471 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 TMEM105Q8N8V8 129 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 ATAD1Q8NBU5 361 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 TCEAL4Q96EI5 215 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 SPATA32Q96LK8 384 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 AGPAT3Q9NRZ7 376 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 HSPBP1Q9NZL4 362 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 DSEQ9UL01 958 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 WDFY4Q6ZS81 3184 aa23.26■■□□□ 1.31
HOXA3-204ENST00000521401 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.25■■□□□ 1.31
HOXA3-204ENST00000521401 KRBA1A5PL33 1030 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 KPNA7A9QM74 516 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 MOSPD3O75425 235 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 ITGB3P05106 788 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 EPHA5P54756 1037 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 TCF15Q12870 199 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 BMT2Q1RMZ1 405 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 SV2CQ496J9 727 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 CEP57L1Q8IYX8 460 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 SIX5Q8N196 739 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 NOC3LQ8WTT2 800 aaKnown RBP23.25■■□□□ 1.31
HOXA3-204ENST00000521401 CACTINQ8WUQ7 758 aaKnown RBP23.25■■□□□ 1.31
HOXA3-204ENST00000521401 MCRS1Q96EZ8 462 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 PAGE5Q96GU1 130 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 ZCWPW1Q9H0M4 648 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 DNAJC25Q9H1X3 360 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 SLC39A2Q9NP94 309 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 SLC2A4RGQ9NR83 387 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 SIX4Q9UIU6 781 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 FBXL21Q9UKT6 434 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 AGAP1Q9UPQ3 857 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 UBE4BO95155 1302 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 PTPRJQ12913 1337 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 ZDBF2Q9HCK1 2354 aa23.25■■□□□ 1.31
HOXA3-204ENST00000521401 FAM237AA0A1B0GTK4 181 aa23.24■■□□□ 1.31
HOXA3-204ENST00000521401 ZNF233A6NK53 670 aa23.24■■□□□ 1.31
HOXA3-204ENST00000521401 MICAL2O94851 1124 aa23.24■■□□□ 1.31
HOXA3-204ENST00000521401 PNPLA4P41247 253 aa23.24■■□□□ 1.31
HOXA3-204ENST00000521401 NHLH1Q02575 133 aa23.24■■□□□ 1.31
HOXA3-204ENST00000521401 LMBRD2Q68DH5 695 aaPredicted RBP23.24■■□□□ 1.31
HOXA3-204ENST00000521401 ASTLQ6HA08 431 aaPredicted RBP23.24■■□□□ 1.31
HOXA3-204ENST00000521401 MTSS1LQ765P7 747 aa23.24■■□□□ 1.31
HOXA3-204ENST00000521401 NELFCDQ8IXH7 590 aa23.24■■□□□ 1.31
HOXA3-204ENST00000521401 TTC9BQ8N6N2 239 aa23.24■■□□□ 1.31
HOXA3-204ENST00000521401 GPR152Q8TDT2 470 aa23.24■■□□□ 1.31
HOXA3-204ENST00000521401 ZNF512Q96ME7 567 aaPredicted RBP23.24■■□□□ 1.31
HOXA3-204ENST00000521401 ZNF560Q96MR9 790 aa23.24■■□□□ 1.31
HOXA3-204ENST00000521401 LRRC3Q9BY71 257 aa23.24■■□□□ 1.31
HOXA3-204ENST00000521401 MTMR12Q9C0I1 747 aa23.24■■□□□ 1.31
HOXA3-204ENST00000521401 GDE1Q9NZC3 331 aa23.24■■□□□ 1.31
HOXA3-204ENST00000521401 SLC27A5Q9Y2P5 690 aa23.24■■□□□ 1.31
HOXA3-204ENST00000521401 TULP1O00294 542 aaPredicted RBP23.23■■□□□ 1.31
HOXA3-204ENST00000521401 CLCN5P51795 746 aa23.23■■□□□ 1.31
HOXA3-204ENST00000521401 GPC5P78333 572 aa23.23■■□□□ 1.31
HOXA3-204ENST00000521401 IQCEQ6IPM2 695 aa23.23■■□□□ 1.31
HOXA3-204ENST00000521401 PDZD4Q76G19 769 aaPredicted RBP23.23■■□□□ 1.31
HOXA3-204ENST00000521401 LRRTM3Q86VH5 581 aa23.23■■□□□ 1.31
HOXA3-204ENST00000521401 ELMOD1Q8N336 334 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms