RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 TNNC2P02585 160 aa22.26■■□□□ 1.15
TRIM35-203ENST00000521253 KRT19P08727 400 aa22.26■■□□□ 1.15
TRIM35-203ENST00000521253 OR4Q2P0C623 313 aa22.26■■□□□ 1.15
TRIM35-203ENST00000521253 DLATP10515 647 aaKnown RBP22.26■■□□□ 1.15
TRIM35-203ENST00000521253 CPB1P15086 417 aa22.26■■□□□ 1.15
TRIM35-203ENST00000521253 ELF1P32519 619 aa22.26■■□□□ 1.15
TRIM35-203ENST00000521253 RBP5P82980 135 aa22.26■■□□□ 1.15
TRIM35-203ENST00000521253 RTL10Q7L3V2 364 aa22.26■■□□□ 1.15
TRIM35-203ENST00000521253 SLC9A9Q8IVB4 645 aa22.26■■□□□ 1.15
TRIM35-203ENST00000521253 LRRC52Q8N7C0 313 aa22.26■■□□□ 1.15
TRIM35-203ENST00000521253 TDRD5Q8NAT2 981 aaKnown RBP22.26■■□□□ 1.15
TRIM35-203ENST00000521253 TMEM174Q8WUU8 243 aa22.26■■□□□ 1.15
TRIM35-203ENST00000521253 MFSD14AQ96MC6 490 aa22.26■■□□□ 1.15
TRIM35-203ENST00000521253 FNBP1Q96RU3 617 aa22.26■■□□□ 1.15
TRIM35-203ENST00000521253 GZF1Q9H116 711 aaPredicted RBP22.26■■□□□ 1.15
TRIM35-203ENST00000521253 DSEQ9UL01 958 aa22.26■■□□□ 1.15
TRIM35-203ENST00000521253 SCN1AP35498 2009 aa22.26■■□□□ 1.15
TRIM35-203ENST00000521253 CLUHO75153 1309 aa22.26■■□□□ 1.15
TRIM35-203ENST00000521253 MTCL1Q9Y4B5 1905 aaKnown RBP22.25■■□□□ 1.15
TRIM35-203ENST00000521253 PRRG1O14668 218 aa22.25■■□□□ 1.15
TRIM35-203ENST00000521253 SEC24AO95486 1093 aa22.25■■□□□ 1.15
TRIM35-203ENST00000521253 NR3C1P04150 777 aa22.25■■□□□ 1.15
TRIM35-203ENST00000521253 ALADP13716 330 aa22.25■■□□□ 1.15
TRIM35-203ENST00000521253 WSCD1Q658N2 575 aa22.25■■□□□ 1.15
TRIM35-203ENST00000521253 RNF19BQ6ZMZ0 732 aa22.25■■□□□ 1.15
TRIM35-203ENST00000521253 OTOP3Q7RTS5 596 aa22.25■■□□□ 1.15
TRIM35-203ENST00000521253 TCEAL8Q8IYN2 117 aa22.25■■□□□ 1.15
TRIM35-203ENST00000521253 GUF1Q8N442 669 aaKnown RBP22.25■■□□□ 1.15
TRIM35-203ENST00000521253 ERCC4Q92889 916 aaPredicted RBP22.25■■□□□ 1.15
TRIM35-203ENST00000521253 CGRRF1Q99675 332 aa22.25■■□□□ 1.15
TRIM35-203ENST00000521253 CYP4F11Q9HBI6 524 aa22.25■■□□□ 1.15
TRIM35-203ENST00000521253 AFF4Q9UHB7 1163 aaKnown RBP22.25■■□□□ 1.15
TRIM35-203ENST00000521253 C2orf16Q68DN1 1984 aa22.25■■□□□ 1.15
TRIM35-203ENST00000521253 CALUO43852 315 aaPredicted RBP22.24■■□□□ 1.15
TRIM35-203ENST00000521253 N4BP1O75113 896 aaKnown RBP22.24■■□□□ 1.15
TRIM35-203ENST00000521253 XYLBO75191 536 aa22.24■■□□□ 1.15
TRIM35-203ENST00000521253 PRPF40AO75400 957 aaKnown RBP22.24■■□□□ 1.15
TRIM35-203ENST00000521253 POU2F2P09086 479 aa22.24■■□□□ 1.15
TRIM35-203ENST00000521253 TNNI1P19237 187 aa22.24■■□□□ 1.15
TRIM35-203ENST00000521253 ADCY1Q08828 1119 aa22.24■■□□□ 1.15
TRIM35-203ENST00000521253 BFSP1Q12934 665 aa22.24■■□□□ 1.15
TRIM35-203ENST00000521253 MYBPC2Q14324 1141 aa22.24■■□□□ 1.15
TRIM35-203ENST00000521253 GRASPQ7Z6J2 395 aaPredicted RBP22.24■■□□□ 1.15
TRIM35-203ENST00000521253 METTL23Q86XA0 190 aa22.24■■□□□ 1.15
TRIM35-203ENST00000521253 SMYD4Q8IYR2 804 aaPredicted RBP22.24■■□□□ 1.15
TRIM35-203ENST00000521253 ZDHHC14Q8IZN3 488 aa22.24■■□□□ 1.15
TRIM35-203ENST00000521253 OR10T2Q8NGX3 314 aa22.24■■□□□ 1.15
TRIM35-203ENST00000521253 TMEM209Q96SK2 561 aa22.24■■□□□ 1.15
TRIM35-203ENST00000521253 RTP3Q9BQQ7 232 aa22.24■■□□□ 1.15
TRIM35-203ENST00000521253 RMND1Q9NWS8 449 aa22.24■■□□□ 1.15
TRIM35-203ENST00000521253 POLIQ9UNA4 740 aa22.24■■□□□ 1.15
TRIM35-203ENST00000521253 TRAF3IP3Q9Y228 551 aa22.24■■□□□ 1.15
TRIM35-203ENST00000521253 SMC2O95347 1197 aa22.23■■□□□ 1.15
TRIM35-203ENST00000521253 CASP4P49662 377 aa22.23■■□□□ 1.15
TRIM35-203ENST00000521253 NTHL1P78549 312 aa22.23■■□□□ 1.15
TRIM35-203ENST00000521253 GPR17Q13304 367 aa22.23■■□□□ 1.15
TRIM35-203ENST00000521253 TRAPPC11Q7Z392 1133 aa22.23■■□□□ 1.15
TRIM35-203ENST00000521253 SPATA20Q8TB22 786 aa22.23■■□□□ 1.15
TRIM35-203ENST00000521253 PLEKHO2Q8TD55 490 aa22.23■■□□□ 1.15
TRIM35-203ENST00000521253 ACSF2Q96CM8 615 aaPredicted RBP22.23■■□□□ 1.15
TRIM35-203ENST00000521253 PGLYRP2Q96PD5 576 aa22.23■■□□□ 1.15
TRIM35-203ENST00000521253 GSDMAQ96QA5 445 aa22.23■■□□□ 1.15
TRIM35-203ENST00000521253 HOOK1Q9UJC3 728 aaKnown RBP22.23■■□□□ 1.15
TRIM35-203ENST00000521253 MAFFQ9ULX9 164 aa22.23■■□□□ 1.15
TRIM35-203ENST00000521253 PCDHA5Q9Y5H7 936 aa22.23■■□□□ 1.15
TRIM35-203ENST00000521253 INSL5Q9Y5Q6 135 aa22.23■■□□□ 1.15
TRIM35-203ENST00000521253 DENND4AQ7Z401 1863 aa22.22■■□□□ 1.15
TRIM35-203ENST00000521253 KINO60870 393 aaKnown RBP22.22■■□□□ 1.15
TRIM35-203ENST00000521253 VNN2O95498 520 aa22.22■■□□□ 1.15
TRIM35-203ENST00000521253 PLCD3Q8N3E9 789 aa22.22■■□□□ 1.15
TRIM35-203ENST00000521253 PDCL2Q8N4E4 241 aa22.22■■□□□ 1.15
TRIM35-203ENST00000521253 ZNF516Q92618 1163 aa22.22■■□□□ 1.15
TRIM35-203ENST00000521253 SMARCE1Q969G3 411 aa22.22■■□□□ 1.15
TRIM35-203ENST00000521253 HPDLQ96IR7 371 aa22.22■■□□□ 1.15
TRIM35-203ENST00000521253 HCFC1R1Q9NWW0 138 aa22.22■■□□□ 1.15
TRIM35-203ENST00000521253 GDAP2Q9NXN4 497 aa22.22■■□□□ 1.15
TRIM35-203ENST00000521253 LIMD1Q9UGP4 676 aa22.22■■□□□ 1.15
TRIM35-203ENST00000521253 L1RE1Q9UN81 338 aa22.22■■□□□ 1.15
TRIM35-203ENST00000521253 R3HCC1Q9Y3T6 440 aaKnown RBP22.22■■□□□ 1.15
TRIM35-203ENST00000521253 SNX9Q9Y5X1 595 aa22.22■■□□□ 1.15
TRIM35-203ENST00000521253 LRG1P02750 347 aa22.21■■□□□ 1.15
TRIM35-203ENST00000521253 GBP2P32456 591 aaPredicted RBP22.21■■□□□ 1.15
TRIM35-203ENST00000521253 MYO1EQ12965 1108 aa22.21■■□□□ 1.15
TRIM35-203ENST00000521253 NFIL3Q16649 462 aa22.21■■□□□ 1.15
TRIM35-203ENST00000521253 CEP135Q66GS9 1140 aa22.21■■□□□ 1.15
TRIM35-203ENST00000521253 GET4Q7L5D6 327 aaPredicted RBP22.21■■□□□ 1.15
TRIM35-203ENST00000521253 ELOA2Q8IYF1 753 aaPredicted RBP22.21■■□□□ 1.15
TRIM35-203ENST00000521253 THEM5Q8N1Q8 247 aa22.21■■□□□ 1.15
TRIM35-203ENST00000521253 PARD3BQ8TEW8 1205 aa22.21■■□□□ 1.15
TRIM35-203ENST00000521253 MYADMQ96S97 322 aa22.21■■□□□ 1.15
TRIM35-203ENST00000521253 C1QTNF1Q9BXJ1 281 aa22.21■■□□□ 1.15
TRIM35-203ENST00000521253 CRISPLD1Q9H336 500 aa22.21■■□□□ 1.15
TRIM35-203ENST00000521253 DNMT3BQ9UBC3 853 aaKnown RBP22.21■■□□□ 1.15
TRIM35-203ENST00000521253 TSC2P49815 1807 aa22.2■■□□□ 1.14
TRIM35-203ENST00000521253 HUS1O60921 280 aa22.2■■□□□ 1.14
TRIM35-203ENST00000521253 CST3P01034 146 aaPredicted RBP22.2■■□□□ 1.14
TRIM35-203ENST00000521253 FSHRP23945 695 aa22.2■■□□□ 1.14
TRIM35-203ENST00000521253 NR2F2P24468 414 aa22.2■■□□□ 1.14
TRIM35-203ENST00000521253 PTPN21Q16825 1174 aa22.2■■□□□ 1.14
TRIM35-203ENST00000521253 ZCWPW2Q504Y3 356 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms